Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00682 GTGGAAATAATGTAGAAAATCAGGGTATTTATTGCAACAGAGATGGGACCAAAAGCAAAGAAGATTAGGAGCCCTTGGTTTTGGCGCTTTCTACGCTCGTCGCTGAAACGCCATTGAACCTTGAATCATTCTTCACTCCTTTGGTCTCAGTCAAACCATTCTCTCTCGCGCGCGCTTCAAATTCAATCTGCAATTCCAATTCCTCCGGAGTTGGTTCCATTCTCCGATGAACCATCTCAAATCCATGATATAATGTAAACGATACACGGACGTAAATGCGGTTTTGATTCAGATCCAGATTCATGGGGATTTGCTTCAGCATTGAAGACCAAAACCCGCTCTCCATCTCCGATTCGAACGCGAAGTCTAAGCCTGCAGGATCCGCAGGTCATGAATCTGGCGCTCCATTGACTTCCATGAATATCAAAGATCTCCGCGAAGGCGCTGGATACAGCAATGTGGATATTTTCACGTACGAAGAGTTGAGGCTCGCGACGAAGCACTTTCGTCCCGATTTTATTTTAGGAGAAGGAGGATTCGGCGTTGTATATAAAGGTGTCATAGACAATAGTGTGAGGCCAGGTTACAAGGCCACTGTGGTCGCCATTAAGGAACTTAATCGCGAAGGATTTCAAGGCGATCGGGAATGGCTTGCGGAAGTTAACTATTTAGGTCAATTCAGTCACCCCAATCTGGTGAAGCTCATCGGATATTGCTGTGAGGATGAGCACCGGTTATTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCTACATTGACTTGGTCAAAAAGAATGAAGATTGCTTTGCATGCTGCAAGGGGGCTTGCTTTTCTTCATGGTGCAGAAAGACCTATCATATATCGTGACTTCAAGACTTCAAATATCTTGCTAGATGCGGATTTCAATGCGAAGCTTTCCGATTTTGGCCTTGCAAAGGATGGCCCAATGGGGGATCAAACCCATGTTTCAACACGAGTAATGGGCACATATGGATATGCCGCTCCTGAGTATGTCATGACTGGGCATTTGACAGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTTGAAATGCTTATTGGCAGGAGAGCATTAGACAAAAGCAGGCCCAGCCGAGAGCACAACTTGGTTGAGTGGGCCCGTCCGCTACTAAATCATAATAAGAAACTTTTGAAAATTTTAGACCCAAAACTAGAGGGCCAATATTCAAGTAAAACTGCATTGAAGGTTGCCCATTTAGCATACCAATGTCTTAGCCAAAACCCGAAAGGCAGACCGCTAATGAGCCAGGTTGTTGAAATTCTCGAAAACTTTCAGTCAAAGGGGGAAAATGAGGAAGATCAAATGCTTCAAACTGGTGGTACCAGTATAACCCTTTATGAGGTTCCTAAGGGCAGCAAGGACACTCCAACTTAGGGCTACAACCAAACTAAAAATGACGAGTCTTACACGGGCGAAGCTTGATGAGAAATGAAAAAAAAAAAAGAGAAGCTGAAGCTAGCCTTTAATTGACTTGTGTGGTTCTTTCACCAAAGTTTGCTCTCGAGATACGTCGTTATCTTCCTGAAGATGAAGTTTCACCAATGTGGGTGGCGATTAAAATCTGTACAAAATGTAGACAGGTGGATCCGGTTGGTGTTTCCAGATGTTGTTTGCTTTGAGCAGAATTGGCGAAGTATTTTCCTCTGTTGTTTTTTGTTCCAATTTTCAGTGATCAGGACGCTGTTTATTGAAATATTTAACACAGTTATTGTATAACACTTTTTAACTACTGCGCTCGAAATGCATTCAGTTAAACATGTTATCCGTCAAATCGATAGTAGGGTTGGGGAT 1865 0.4359 MGICFSIEDQNPLSISDSNAKSKPAGSAGHESGAPLTSMNIKDLREGAGYSNVDIFTYEELRLATKHFRPDFILGEGGFGVVYKGVIDNSVRPGYKATVVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKLEGQYSSKTALKVAHLAYQCLSQNPKGRPLMSQVVEILENFQSKGENEEDQMLQTGGTSITLYEVPKGSKDTPT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00682 381 SUPERFAMILY Protein kinase-like (PK-like) 50 346 IPR011009 -
Pste3g00682 381 MobiDBLite consensus disorder prediction 15 36 - -
Pste3g00682 381 Gene3D Phosphorylase Kinase; domain 1 44 150 - -
Pste3g00682 381 CDD STKc_IRAK 74 348 - -
Pste3g00682 381 PANTHER OS01G0588500 PROTEIN-RELATED 34 349 - -
Pste3g00682 381 FunFam Serine/threonine-protein kinase BIK1 36 150 - -
Pste3g00682 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pste3g00682 381 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Pste3g00682 381 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Pste3g00682 381 FunFam Probable serine/threonine-protein kinase PBL8 151 363 - -
Pste3g00682 381 Gene3D Transferase(Phosphotransferase) domain 1 151 368 - -
Pste3g00682 381 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00682 Pste-Chr3 4317821 4324515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00682 56 345 Glycoside Hydrolase AT3G07070 51.877 1.63e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste3g00682 PK_Tyr_Ser-Thr 2.1e-46 CL0016