Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00679 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAACATGAAACTATCTTCATCTCAGCACCAAGATGGAAAAGGTAGAGGGGCTGATATGAAGAAGAAAATGAAAAAATCAAGGTCAATAAAGCTTTCTGATCTTGAGGCTCTCCAATCATCATCGTCTTCTTCAAGAAGAAGCTTATCTCAACCAGGGAAGCCACCCCCTCTTCATACTCCAACAACTACAGCATCAGCATCAGCATCACCACAGAAGCAGCAACCTGTGTTCAGAACAACAGATGGATCACCTAATTACATGAAGCCAACAAGCAGTTCTCATGCCAAAAAGGAGCTTTTCCCTGTAAGCCTCAGGAGCACTCAACCTGGTTCTGATTTTAAGAATCATCCTAGAAAATTTTCCAGTGATTCCAAGGTTTCCTGTGCTAAGAAACCTGCAAAAGCCTTGACAAGAACCTCTAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTAGTTTCAAGGCTTCAAGAGCTTGTTCTAGAAAATCCACCAGAGCTGTTATGTGTGCAGATATGAATGCACCACATAGAGCCACTTGTTCTTCAACTATGAAGGACTCAAAGTTCCCTGCATACCTCATACTTAGCCCTGGGGGAACTGAGTCAGAGGGAACTTCAACCATGAAGGTTTGCCCTTACACATATTGTTCTCTTAATGGTCATCATCATGCTGATTTGCCACCATTGAAGAGCTTCATGTCTGCGAGGAGGCGCCTTTTGAAGACACGGAAGCGTGCAAAGCTTGAAGCTCTTAGCCCTCGGAGACTGAAGGTTCCTCTTGAGAAACACAAGGAGGATGGTGTTCAGCAGAATGTCTTTGATTCAAAACCTGCTTGTGATGAAATTGGTCTTGATATCTTCATTGAAATCTATGCCAATGAAAAAGATGCAAAACCAAAAGGAGAAAAAGAAATGGAGAGAATAGATTTTTTCAGAGAGATTGAGGATCATGAATACAACAAGTCCACAGTTGAGGATAATGACATGGCAGCAAGTGAGGAGGGTGTGATGCAAATCACTACACCAAGAAGTATTGGTAATGATATTCCTTCTCCCTTTATATCTGAGATTTATCTTGAGGAGGCTTTGAAAAATTCCTTTGGTGAAGTTGCAAATGAAGTAGATACCACACTCCAAGAGCAAAATACAGAAGATGCAGATGAAGATCACCAAGCAAGTGTCTGGTTTCATGAAGAAATGAGTATGGGAAGCTACTGCAGTGATGGGGAACAAGACATGGGGGATGCTGACATGGATGATTCTGACTCCAAAACTTATGGTATGGAGTGGGAAGAGGATCGATTTTGCGGATTTGTTGATCAAGAAGAGGATGATGTTTCTTCTGTGTGCACTGAGGAGGACAATGACTCAAAAGTTGAGTTCTCATCAGAGAGTTCTCATGATGTGTCAGTAATATGGTTAGATGATATCCTTGGTGGCTATTATGAGGACTTTCTGGTTGATGAAACAAACAAAGAAGTCAATTTAAAAGAAAGCACCTACATTGAAGAACAACCTAGTGGCATTAGTCCTGTCCTTGAAGACACAAATGGAAGCAATGAAACTCAAGAAATTGAGTACTCCTCCACAGGTTTGGGTTGTGACCAACCCTTCTTCACAGAGGAAATATTTGAGTACCAGACAAATACACAAGAAAGTGGTGGAGAAAATGATGAGGCCCGTTGCAACATAAAGGAACTCGATGAAGAAACAATTGACAATTCTCAACGTCAGATGAGTGAAACTTGCCAAATTGATGAGACTGGTGAAGATGGAAACACAAGAAGCCTAGAGAACAATGATGAGAGCAATAAAGGGGAGAGTCAAATTGAGTTGGTGGATGTGTTTGAAGAAAGTGACATAGCTGCTCAAGATCAGAATTTGTTGGACAAAGACCAAGGCAAAGGAAAAAGGTTCCAAAGAACAAGTTGCATAAGTGCTGAAGAGGAAAGCACAAGCATGAATTGGAATGCAAATAGGAGAAAAAGGGGTGATGAAGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAGCCAAATTTTCTGCCATTGGTTCCTGAACCAGAGCAAGAGAAGATTGACCTGAGGCATCAAATGATGGATGAGAGAAAGAATTCAGAGGAATGGATGCTTGATTGTGCACTAAGACAAGTTGTGACAAAACTTGCTCCAGCTAGGAAGAAGAAGGTGGCACTGCTGGTTGAAGCCTTTGAAACAGTGATGCCACAAGCACCCAAATGTGAAACCCGTGTGAGAAACAATGCAGCATTTGGTCATTCAGGAAGAATTCAAGCTTGTAGCTGA 2379 0.4157 MVQRKVPSKLGIQAEHVKSDKRLANMKLSSSQHQDGKGRGADMKKKMKKSRSIKLSDLEALQSSSSSSRRSLSQPGKPPPLHTPTTTASASASPQKQQPVFRTTDGSPNYMKPTSSSHAKKELFPVSLRSTQPGSDFKNHPRKFSSDSKVSCAKKPAKALTRTSSLSLVRTLTKTTSFKASRACSRKSTRAVMCADMNAPHRATCSSTMKDSKFPAYLILSPGGTESEGTSTMKVCPYTYCSLNGHHHADLPPLKSFMSARRRLLKTRKRAKLEALSPRRLKVPLEKHKEDGVQQNVFDSKPACDEIGLDIFIEIYANEKDAKPKGEKEMERIDFFREIEDHEYNKSTVEDNDMAASEEGVMQITTPRSIGNDIPSPFISEIYLEEALKNSFGEVANEVDTTLQEQNTEDADEDHQASVWFHEEMSMGSYCSDGEQDMGDADMDDSDSKTYGMEWEEDRFCGFVDQEEDDVSSVCTEEDNDSKVEFSSESSHDVSVIWLDDILGGYYEDFLVDETNKEVNLKESTYIEEQPSGISPVLEDTNGSNETQEIEYSSTGLGCDQPFFTEEIFEYQTNTQESGGENDEARCNIKELDEETIDNSQRQMSETCQIDETGEDGNTRSLENNDESNKGESQIELVDVFEESDIAAQDQNLLDKDQGKGKRFQRTSCISAEEESTSMNWNANRRKRGDEDDDEMRKFNPKEPNFLPLVPEPEQEKIDLRHQMMDERKNSEEWMLDCALRQVVTKLAPARKKKVALLVEAFETVMPQAPKCETRVRNNAAFGHSGRIQACS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00679 792 MobiDBLite consensus disorder prediction 56 74 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 684 701 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 616 632 - -
Pste3g00679 792 Pfam Plant calmodulin-binding domain 664 767 IPR012417 GO:0005516
Pste3g00679 792 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 767 IPR044681 GO:0005516
Pste3g00679 792 MobiDBLite consensus disorder prediction 1 150 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 684 708 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 601 615 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 83 116 - -
Pste3g00679 792 MobiDBLite consensus disorder prediction 594 632 - -
Pste3g00679 792 SMART CaM_binding_2 658 767 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00679 Pste-Chr3 4291420 4293798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00679 664 792 Calmodulin-binding Proteins AT2G38800 46.923 5.37e-29 121