Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00676 ATGGCACTAAGTGGTTGGCATTGCTGGTGGATCACATTGGTTATCTTTTCAGCTCTCATTCTTCCTTCTTTTGGAGCTTCTGATTCAGAGTTGCTCCTCAAGGTCAAGAGTAGCTTGCAAAACTACAACAATGAATTGATCTCATGGAACGCTTCGGTCCCTCCTTGTTCTGGGGGTCATTCCAATTGGCGTGGGATTCTTTGTTACCAAGGAAAAGTGTGGGGGGTGAAGCTTGAGAATATGGGGCTGAGAGGGGTCATTGATGTCCTCTCTCTCAGGAGCTTGCCTTATCTTAGAACGTTAAGTTTCATGAACAATGATTTTGACGGTGCATGGCCTGAAATTCAACATCTGGTTGGTTTAAAGTCTCTTTATCTTTCCAATAACAAGTTTTCTGGGGAGATTCCTTTTAGAACCTTTGAGGGGATGCAGTGGTTGAAAAAGATTCATTTGTCCAACAACCATTTCACTGGTACTATTCCAACTTCGCTGACTTTGTTGCCAAGGCTCATACAGTTGAGGTTGGAGGGAAACGCATTCACTGGTCCCATTCCCCGTTTTCACCGCCATAACAAATTGAAATCATTTAGCGTAGCTAATAATGATCTGGCTGGTGAAATTCCTCGCTCCCTTAGAAGGATGCCCGTTTCTTCATTTTCTGCGGTAGTATTCATTCTTCACAGAAGAAGCAAACGAGGGCAACAAACGTCCTTGGAGAATCCATCCTCAGGCTGTAGCAAAGGACGCGTGAGGGAAGTGGGCAATGAAAGCATTAGGTCATCAAGGTCACTAAGCTCCAACCACAGCAGAAGAGGGGACCACATGAAACTGTCTTTCCTAAGGGATGATAGGGAGAGGTTTGATTTGCAAGAGTTGCTTAGAGCCTCAGCTGAGATTTTGGGCAGTGGCTGTTTCAGCTCTTCTTACAAGGCTTCTTTGATGCATGGCCCAACAATAGTGGTGAAAAGGTTCAAGCAAATGAACAATGTGGGGAAGGAAGAGTTTCAAGAGCACATGAGAAGGTTGGGGAGGTTGAGCCACCCTAACTTGCTTCCTCCTGTGGCTTACTATTACAGAAGGGAGGAGAAGCTCATGGTCACTGACTATGTTCACAATGGCAGCTTGGCTGTTCGCCTTCATGGACACCAATCCCTGGGAGAACCAAGCCTTGATTGGCCAATCCGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAAGGACATGCCGAGCCTAATTGCACCACATGGAAATCTCAAGTCCTCTAATGTTCTATTGACTGAATCTTTTGAGCCCCTCCTCACAGACTATGGATTAGTCCCAGTGATAAACCAGGATTTGGCTCAGGACATTATGGTCATATACAAGTCTCCTGAGTATTTGCAACAAGGAAGAATTACAAAGAAGACTGATGTGTGGTGTCTTGGAATACTAATTCTGGAGATTCTGACTGGCAAGTTCCCGGCTAACTTTCTGCAAAAGGGTAAAGGGAGTGAAGTGAGTTTAGCAAGTTGGGTCCATTCAGTGGTCCCAGAAGAGTGGACAAATGCGGTGTTTGATCAAGATATGGGTGCAACAAAGAACGGTGAGGGAGAGATGGGGAAACTTTTGAAGATTGCCTTAAATTGTGTTGAAGGGGATGTGGATAAGAGGTGGGATTTGAAAGAAGCAGTAGAGAAAATCCAGGAGGTGAAGGAGAGGGATCATGATCAAGAGAATTTTTATACTTCTTATGCTAGTGAAGCAGACATGAAGTCTTCAACTTGA 1779 0.4458 MALSGWHCWWITLVIFSALILPSFGASDSELLLKVKSSLQNYNNELISWNASVPPCSGGHSNWRGILCYQGKVWGVKLENMGLRGVIDVLSLRSLPYLRTLSFMNNDFDGAWPEIQHLVGLKSLYLSNNKFSGEIPFRTFEGMQWLKKIHLSNNHFTGTIPTSLTLLPRLIQLRLEGNAFTGPIPRFHRHNKLKSFSVANNDLAGEIPRSLRRMPVSSFSAVVFILHRRSKRGQQTSLENPSSGCSKGRVREVGNESIRSSRSLSSNHSRRGDHMKLSFLRDDRERFDLQELLRASAEILGSGCFSSSYKASLMHGPTIVVKRFKQMNNVGKEEFQEHMRRLGRLSHPNLLPPVAYYYRREEKLMVTDYVHNGSLAVRLHGHQSLGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTESFEPLLTDYGLVPVINQDLAQDIMVIYKSPEYLQQGRITKKTDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVHSVVPEEWTNAVFDQDMGATKNGEGEMGKLLKIALNCVEGDVDKRWDLKEAVEKIQEVKERDHDQENFYTSYASEADMKSST 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00676 592 Pfam Protein tyrosine and serine/threonine kinase 298 564 IPR001245 GO:0004672|GO:0006468
Pste3g00676 592 ProSiteProfiles Protein kinase domain profile. 294 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00676 592 MobiDBLite consensus disorder prediction 233 271 - -
Pste3g00676 592 FunFam Pollen receptor-like kinase 1 370 579 - -
Pste3g00676 592 SUPERFAMILY L domain-like 53 215 - -
Pste3g00676 592 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Pste3g00676 592 Gene3D Ribonuclease Inhibitor 142 223 IPR032675 -
Pste3g00676 592 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Pste3g00676 592 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 573 IPR046959 -
Pste3g00676 592 FunFam pollen receptor-like kinase 1 263 369 - -
Pste3g00676 592 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Pste3g00676 592 SUPERFAMILY Protein kinase-like (PK-like) 298 570 IPR011009 -
Pste3g00676 592 FunFam Nuclear pore complex protein NUP107 25 186 - -
Pste3g00676 592 Gene3D Transferase(Phosphotransferase) domain 1 370 588 - -
Pste3g00676 592 Gene3D Phosphorylase Kinase; domain 1 259 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00676 Pste-Chr3 4268983 4272697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00676 13 591 Receptor kinase-like Gene Family AT5G35390 52.329 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste3g00676 PK_Tyr_Ser-Thr 6.2e-28 CL0016