Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00673 ATGGACAGATCACCATTTACAAGGCCTGGTAGAGGAAATTACAGATCATACGACTCCTCAATCCCTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATACAGATTCTGTAATGAACCCTCGGCTTTCAACAGGCTCAGATTTTGACATCAGAAGCTTTGGTTCTTCGTTCTCAGGAGCTAAATCAATTGATCATGGTGACTACTCATTCAGTTCACAAGACAGTGGAACATCGATGTCATCATCAATGTTTTCAGCTTCTGATGAAGTGGAAGCTGAAATGAGGAGACTGAAGCTAGAACTGAAGCAGACAATGGAAATGTACAGTGCAGCCTGCAAGGAAGCTATGACAGCAAAGCAAAAGGCACTGGAACTTCAGCGTTGGAAAATGGAAGAACAAAGGAAATTGGAAGAGGCACAATTAGCTGAAGAAACAGCATTGGCAATAGCTGAGAAGGAGAAAGTAAAATGTATGGCTGCCATGGAGGCAGCTGAAACATCTCGAAGAATCGCAGAATTGGAAGCACAAAAGAGAACGAGTGTAGAATCTGAGCATAGGAAGAAGACTGTGGACATCCTTTCACACAGTCCTGCCAGGTACAGAAAATACACTATAGAGGAGATAGAAGAAGCAACAAAACTCTTTTCCAACTCTCTCAAGATCGGTGAAGGTGGTTATGGGCCAGTCTACAGGTGTGAACTAGATCACACACCAGTTGCAGTAAAAGTGCTAAAACCAGACGCAGCTCAGGGACGGTCACAATTTCAGCAAGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTAGGAGCATGCCCAGAATTTGGCTGCTTAGTGTATGAGTACATGGCTAATGGAAGTTTGGACGATTGCCTCTTCCGGAGAGGCAACAAAGGAGCTCTTCCCTGGCAGATAAGATTTCGAATTGCTGCTGAGATTGCTACTGGGCTCCTTTTCCTACACCAGACAAAGCCAGAACCACTTGTGCACCGAGACTTGAAACCAGGAAACATTTTGCTTGACCGTAACTTTGTGAGCAAGATCAGTGATGTGGGGTTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACACTGTGACACAGTATCGCATGACATCAACAGCCGGAACTTTTTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTAGGAATCAAATCTGATGTTTACTCGTTGGGGATCATGCTTCTACAGATAATAACAGCGAAGCCACCAATGGGTTTGACTCACCATGTTGGAAGATCTATAGAGAAAGGGACTTTTGCTGAGATGCTTGACCCAGCAGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTTGCCAGGCTTGCCTTGGCATGTGCAGAGATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTATTACCTGAGCTCAATAAACTCAGAGATTTTGCTGAAGATAACATATCAAAGATGATGATATTCGGTATTCCCACTGGATTCACTCCCAGAAGCAACTACAGTTACTCACAGTCTTCCATTTCCTCAGCTCAGGAATGTCCGGATATGAAAGCCGCTCAAGCTCGTCGTTTACAAGTTGATAATGATTGA 1650 0.4448 MDRSPFTRPGRGNYRSYDSSIPDSDISFVSSGRPSVDRMFPSMYDDTDSVMNPRLSTGSDFDIRSFGSSFSGAKSIDHGDYSFSSQDSGTSMSSSMFSASDEVEAEMRRLKLELKQTMEMYSAACKEAMTAKQKALELQRWKMEEQRKLEEAQLAEETALAIAEKEKVKCMAAMEAAETSRRIAELEAQKRTSVESEHRKKTVDILSHSPARYRKYTIEEIEEATKLFSNSLKIGEGGYGPVYRCELDHTPVAVKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKGALPWQIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHHVGRSIEKGTFAEMLDPAVEDWPVEHALHFARLALACAEMRRKDRPDLGKVVLPELNKLRDFAEDNISKMMIFGIPTGFTPRSNYSYSQSSISSAQECPDMKAAQARRLQVDND 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00673 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Pste3g00673 549 Coils Coil 138 158 - -
Pste3g00673 549 MobiDBLite consensus disorder prediction 13 31 - -
Pste3g00673 549 SMART serkin_6 228 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00673 549 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 200 300 - -
Pste3g00673 549 Gene3D Phosphorylase Kinase; domain 1 206 300 - -
Pste3g00673 549 Gene3D Transferase(Phosphotransferase) domain 1 301 507 - -
Pste3g00673 549 PANTHER OS02G0152300 PROTEIN 36 515 - -
Pste3g00673 549 MobiDBLite consensus disorder prediction 1 32 - -
Pste3g00673 549 SUPERFAMILY Protein kinase-like (PK-like) 206 487 IPR011009 -
Pste3g00673 549 Coils Coil 100 120 - -
Pste3g00673 549 ProSiteProfiles Protein kinase domain profile. 228 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00673 549 FunFam U-box domain-containing protein 51 301 501 - -
Pste3g00673 549 Pfam Protein kinase domain 231 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00673 Pste-Chr3 4249364 4251624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00673 11 510 Receptor kinase-like Gene Family AT5G35380 68.639 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste3g00673 Pkinase 6.7e-39 CL0016