Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00666 TTGTCAACCGTCTACTCTCACAAACAACCACACAGCAACAAGAAGAAGAAGGTGTGTAAGAGAGAGTTGAAACTTGAAACAGTGTCTGGCACCTTTGACTGGGAGACGACCAAAGTAATGAAGACACAGCCAGACGGTGCCGCAGCCGCAGCCGCCGCACCCAGCGCCGGGGAAGGAGGAGAGAAGAAAATCATAAACGCTGAGCTATGGCAAGCTTGTGCGGGACCGCTTCTCAACCTACCATCGCCTGGAACTCACGTCGTTTACTTCCCTCAAGGCCACAGCGAACAGGTTGCAGCGTCTTTGAAGAAAGATGTGGATGCTCAAGTCCCGAACTATACCAATCTCCCCTCCAAGATACCCTGTCTTCTTCACAATGTCACATTGCATGCAGATCCAGACACGGATGAAGTATATGCTCAGATGACGCTTCAGCCGGTGCTTTCTTTTGACACCGATGCACTGTTAAGATCGGACATTTCTCACAGGTCAATTAAGCCACAACCTGAGTTTTTCTGTAAACAACTAACAGCTAGTGATACGAGTACTCATGGAGGTTTCTCTGTACCCCGCCGTGCTGCAGAGAAGATTTTCCCCTCTCTTGATTACTCTGTGCAACCTCCTGCTCAAGAACTTGTGGCGCGGGATTTGCATGATAATGGCAACCAAAACGTCACTTGCTTACAACTGGATGGAGTCTATTTTGGAAAAAGGCTTTTAGCTGGAGACTCTGTTTTGTTTGTAAGAGATGAAAAGCAACAACTTCTTCTGGGTATTAGACGAGCTAACAGGCAACCCTCCAATTTATCATCTTCAGTACTATCAAGTGATAGTATGCACATTGGTGTTCTGGCTGCAGCTGCTCATGCTGTTGCAAACAATAGTCCCTTCACTGTGTTCTATAATCCTAGGGCTAGTCCCTCAGAATTTGTTATTCCATTAGCCAAGTACTACAAGTCAGTTTATAGCCACCATATATCACCTGGTATGCGCTTCCGAATGATATTTGAAAATGAAGACTCAGGAACAAGAAGATATATGGGTACAATTATAGGTGTCAGTGATCTGGATTCTGTGAGATGGAAAAATTCGCTATGGCGTAATTTGCAGGTTGGTTGGGATGAATCAACTGCTGAGGAAAGGCAAAGGTCTCAGTCTGGGAAATTGAATGAACCTGTGACTACTCCATACTTCATCTGCCCACCTCCTTTCTTCAGATCCAAGAGACCTAGACTATTGGGAATGCCAGATGATGAGCCTGATTTCAATAACCTTTCAAGAGTACAGTTCCTTGGCTTGGATCCTCACGCTCTCCCTGGCTTGAGCTTGGTTCAATGGATGAACATACAGCAAAATCCTGCTTTGTCTAGCTCATTGCTACCAAATTATGTGCCTTCCATGTCTGGATTGGTTCTGCAAAATCTTCCTGGTACAGATATTGCAAATCAGGTGGTGTTTTCTACCCCACAAATCTCTCAATCAATCAACGTATCTGTTGATGCTCATAATATACTTCAGACTTCCCAGCAACTTGATCATATTCAAAAGCAACCGTCCACATCGAGTGCATTAGTAACAGTCATGCAGCCGCTGCAACAATTGGGTGATATCACTCAACAACCAAGGAACTTGACAAATCAAATGTTACCGCAGAATCAAGCTCAAGCCCAACTTTTGAATCCCCAAAATCTTGTCCAAACTAACAATATTCTTCAGCAGCAACAGTCATCAATTCAAAAACGTCAACTGCTTAGAAGTATGTCTCAAAACCCACCCCAGCAGCATCAGGAAACAACAATGGGTCAAAATCAAACGAAAAATTCATTTCCATCCCCTATTCCAGATCATTTTAATCAACAATTACAGATGTCTGATAATCAGGTTCGGCTTCAGTTGTTACAGAAGCTTCAACAGCAACAACAAACTCTCTTGGCACAGCAGTCTGCATTGCAGCAGCCTACTCGAATTCAAATCCAAGACCAGCAGAGGCAGCTCTTAGATTGCCCTAACTCCTGGTCAAGTACTGGAAATTCGTCCTACACTTCAAAACTCTCTCCTGAGGCAAATTCTATCAGCCATCAGATAACAGCGTCTAGTAGCCAGAAAAATCTTCAATTCTCTCATGTACCTCAGCCACCTGCCTTGCTGTCTGAAATGTCGAGCCATGTTGGACTTCCTCCTACAGTTACAACAACCTATCCACTATCTGCCTCTGGTGGAAGTATACTGACTGGAGCTGGGCAATCAGTAATTACTGATGATGTTCCATCTTGTTCCACTTCACCTTCCACAAATAACTGTGCCAGCACTCTTCCTCCAGTGATAAGTTCCCAGATTCATATGAGCACAACATTAGGGGATGACATGGATCAGTCTGCTGTCACGATCTTGAGTCCAAGTGCCTTAGAAACAGTGTCATCTAATGCAAACATGGTAAAAGATGTACAACACAAGTATGAAGTAAAGCCTTCTTTAAACATTTCCAAAACTCAGAATCAAGGGAATGTTTCCCCTCAGGCATGTTTGAATGGTGTTGTTGTCCAGACAGACTATTTGGATTCATCATCTTCCACAACTTCGGTTGGCCATTTTCAGAGTGATACTCGAATGCTTCAGAATAACAACCCTTTTTGTTACAATCCACAATCTATGTATTGTAGAGACAATAGTAAAATCGTGGAAAGCAATGTTCCATATTGTAATAACCTTAATGGCCAAATGGACATGCTGCCAAATGAAGATTCTCTTCTAACCAAAGGCACAGTGGGGCTTATGAATTTGTCAAATAATTTCTCTTCAGGAGGCTTGCTTGGAGACTATGAAAATAACAGAGTTGTTCAGCCAGAACTTTCTTCTTCAATGGTTTCACAGACATTTGATGTCCCTGATATGAGCTTCAATTCAATTGATTCCACAATAAATGGTAATAGTTTCTTGAATAGAGGTCCATGGGCTCTGCTGCCACCGCCACCACCTCCGCCACCACCAGCACCACCACAACAACAGTTTCATCCGATGAGAACATACACCAAGGTATATAAACGTGGAGCTGTGGGAAGGTCCATAGACATAACACGATATTCAGGTTATGAGGAGCTTAAGCAGGATCTGGCTCTCAGGTTTGGTATTGAGGGACAGCTGGAGGATCGACAAAGAATTGGTTGGAAACTTGTTTATGTAGATCATGAAAACGATGTTCTGCTTGTGGGAGATGACCCCTGGGAGGAGTTTGTTAACTGTGTCCGCTGCATTAAAATACTTTCGCCTCAAGAAGTTCAACAAATGAGCTTGGATGGAGATTTTGGCAATGGCAGCCTTCCATATCCAGCAGGCAGCAGCTCTGATGGTGGGAATGCTTAAATGGCGTCCAAGAATCTGCTAACTATTCTTCCATGTTGGTAGCTTACATTGTTTTTAGGAGGTATCAGTTATTGTTGTTTGAAGGTTATGGGGCCGTGCTGCAGAAGATTTTGTTCGGCTGTTGCAGCCAGGGTAATATTTGCAGTTTAAAAGGAGCAAATTTGTACCTGCTCAGTACTGGCGAATTTGAAAAGCCAAAAGAAGAGGTGGAAAAACTATCTGCCCTCAATCTACCACTTACATTAAGGTTGTTAACCTGGTAGTGAGTCAAATATTTGGACCACAAGCACATCCCAACAAAGATATGTTAAGCCATGCATGTGATCATGTTGTAAAGTGGAGCAGTTCTCTTGGCAGCATTAAAATATGTATTTAGTGCAGTGTATTGTAGAAAGAAAGGCTGAAAATTAGCGGATGGTTCAGTGTATAAAAGTAGGATCTTGTGCGGTCTTGGTTGGCCCCTTCTGTAAAGTACTAGGCAGCTAGCTCGTGAGAAAATTCTACTAATCCTAATGTAGTAAAGTTGTATGTATCAAATATTCAAATAGAGAAAACATATGCGCGCATTCAATTAAAAGCTTTAATCACTATAGTTGAAATACTTTCC 3967 0.4288 LSTVYSHKQPHSNKKKKVCKRELKLETVSGTFDWETTKVMKTQPDGAAAAAAAPSAGEGGEKKIINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMTLQPVLSFDTDALLRSDISHRSIKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPSLDYSVQPPAQELVARDLHDNGNQNVTCLQLDGVYFGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAHAVANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHHISPGMRFRMIFENEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQRSQSGKLNEPVTTPYFICPPPFFRSKRPRLLGMPDDEPDFNNLSRVQFLGLDPHALPGLSLVQWMNIQQNPALSSSLLPNYVPSMSGLVLQNLPGTDIANQVVFSTPQISQSINVSVDAHNILQTSQQLDHIQKQPSTSSALVTVMQPLQQLGDITQQPRNLTNQMLPQNQAQAQLLNPQNLVQTNNILQQQQSSIQKRQLLRSMSQNPPQQHQETTMGQNQTKNSFPSPIPDHFNQQLQMSDNQVRLQLLQKLQQQQQTLLAQQSALQQPTRIQIQDQQRQLLDCPNSWSSTGNSSYTSKLSPEANSISHQITASSSQKNLQFSHVPQPPALLSEMSSHVGLPPTVTTTYPLSASGGSILTGAGQSVITDDVPSCSTSPSTNNCASTLPPVISSQIHMSTTLGDDMDQSAVTILSPSALETVSSNANMVKDVQHKYEVKPSLNISKTQNQGNVSPQACLNGVVVQTDYLDSSSSTTSVGHFQSDTRMLQNNNPFCYNPQSMYCRDNSKIVESNVPYCNNLNGQMDMLPNEDSLLTKGTVGLMNLSNNFSSGGLLGDYENNRVVQPELSSSMVSQTFDVPDMSFNSIDSTINGNSFLNRGPWALLPPPPPPPPPAPPQQQFHPMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLALRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGSLPYPAGSSSDGGNA 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00666 1119 SMART B3_2 172 263 IPR003340 GO:0003677
Pste3g00666 1119 Pfam Auxin response factor 287 370 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pste3g00666 1119 FunFam Auxin response factor 1002 1096 - -
Pste3g00666 1119 ProSiteProfiles PB1 domain profile. 1007 1091 IPR000270 GO:0005515
Pste3g00666 1119 SUPERFAMILY DNA-binding pseudobarrel domain 165 290 IPR015300 -
Pste3g00666 1119 MobiDBLite consensus disorder prediction 576 610 - -
Pste3g00666 1119 Gene3D - 170 262 IPR015300 -
Pste3g00666 1119 Gene3D - 325 387 - -
Pste3g00666 1119 Pfam AUX/IAA family 1008 1092 IPR033389 -
Pste3g00666 1119 Gene3D - 1003 1096 - -
Pste3g00666 1119 FunFam Auxin response factor 325 395 - -
Pste3g00666 1119 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 62 1096 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste3g00666 1119 SUPERFAMILY CAD & PB1 domains 1020 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00666 Pste-Chr3 4187276 4194901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00666 54 525 B3 DNA Binding Superfamily AT1G19220 57.916 4.87e-164 512