Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00658 CCAAAACCCTACTTCTCCTGGCATATTATCCTCACCAGTCACCACACTTATGCTACTTCTCTAACTCACTTCCTCTCCTCTCTGTCATTTCATATTTCCGGGAACGTAGAGTGCCAAAGCTGTAATCGCGACTGTGATAGTTACATAGCACATCAGGATAAGGGTGGAAATGGAGTGATAGTGCCCTCGTATACTTTATCGCGCCACGAATTTCGCGTATGTGGTGGAAAAGGACTATCGCGAGTTGCTGCTGCTGCAAGAAACGGTTCTTCAACTTCTGCATACGATATGGCCGTGGCGACGAATGTTAAGAAAAAACAAAAGCGTAAATGTCTTCAGGAACTGTTTACAACCGATTACATTGTGAACAAAGTCTTGCGGAAGGATGGTCCTCCACTTGGTCAGGAATTTGATTTTCTTCCTTCTGGACCCAAATATTTCACTTCTGCTTGTGAAGAGGACCAAGGATCCTCCCAAAGGAGGAAGGTTTCCAAGAGTGCAATTCAAAGTCTCACCAATTGTAGTATGAAAACACCTGTGAAGAAACATGGTACTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCCTGATGCTGGAGACCTTCCAATTGGTTTTGGTGTTGCTGGCCAAGAGGTTCCTCTAATCTCGAATTCTACACGAGAAAAACCAGTCTATGAGAACAGCAGGTTATCAAAAAAAGTAAACAGGAATGGAATGCCAAAAAATAAAATGCAGAATAAGAGAAATAAATTGCAGGATAAGAAGAAACTTCCCATTAAAAGAGGAGTGGGGGAATTGAACCTTTATGTGACTCAGAACCAGTCACCAAAGGAAAAATGTGGACTAGCTTTTGATAATGCAATATCTGAGGAGGGAGTTGATCGAGTTTCGATGTTAATTGATGATGAAGAGTTAGAACTTAGAGATTTACAAGAAGGAACCAATCTGTTTATGTGTTCTGATCATCTTGCTGCTAGTGGAATGCTTGGCTGTTCACTTTGTAAAGATGTGCTAGTGAAGTTTCCACCAGATACTGTCAAGATGAAGAAACCTATCCATTTGCAACCTTGGGACTCATCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCATTTATACATATGCTATAGTTGTTGATATTTGTCCCTTCACTCTTGATGAGTTTGTTCAAGCATTTCATGATAAGGACTCGATGTTACTTGGCAAGATTCATGTGGCCCTTCTCACACTTCTTCTATCTGACATTGAAGTGGAGCTTACTAATGGGTTTTCACCTCATTTAAATAAATCATGTAACTTTCTTGCTTTGCTTCATTCGGTTGAAAGTCAAGAATTTTCCCCTGACTTCTGGAAAAGATCTCTAAATTCTCTAACTTGGATTGAAATACTGCGTCAAGTTCTGGTTGCTTCTGGATTTGGTTCAAAACAAGGTTCCTTGCGTAGAGAGGTCCTTAGCAAGGAATTGAATCTTCTTGTAAACTATGGTCTATGCCCTGGCACGTTGAAGACTGAGTTGTTTAACATCTTGTCAGAGAGAGGAAATATAGGATGCAAAGTAACTGATCTAGCAAAGTCAATGCAGGTTGCTGAATTAAATCTTGCCAGCACAACAGAGGAACTTGAATCTTTAATATGCTCCACACTTTCTAGTGATATTACTTTATTTGAAAAGATTTCATCAACTGCATATCGATTGCGCATGAGTACTGTAATGAAGGACAGTGATGAATCTCATTCAGATACAGAGGACTCTGGTAGTGTTGATGATGAACTTAATGACACTGACATGAGTAGCAGTGGTGACGATTTTGAAAGTGATTCAATAAAATCCAGTATAAGAAAATTGAAGCGTGCAAATAGTCATAGAAATAATATGCTGAAAGTATACACTGAAATTGATGAGAGCCATCCAGGAGAAGCTTGGTTACTAGGACTGATGGAGAGTGAATATTCAGACTTGAACATTGAAGAAAAATTGAATGCATTGGCAGCTTTAACTGATCTTGTTTCATCTGGATCCAGCATCAGGCTGAAGGATTCAACAAAAGTTACAGCTGATTGCAATTCTAGCATCCAATTACGAGGGTCCGGAGCTAAAATAAAGAGATCAGTAGTAAAGAAACCTGGGCCACTTTGGAACCAGAAAGTAAAATTGAATTCTGATCCCTGTACAGTAGATTCCTCACCATTAATTTCAAGATTCAATAGTCGTGAGGGTTCCTCTGGGAAAGGAAAAGGTTCATCTATTTTGCACCCCATTCAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATACTGGCTTTTCTTGGGCCCGTGTAATGTAGATGATCCAGGTCACAGGAGGATATACTTTGAATCTTCTGAAGATGGTCACTGGGAGGTTATTGATACCGAAGAGGCCTTGTGTGCCTTGTTGTCTGTTTTGGATGATAGAGGGAAACGGGAAGCCCTTCTTATTGAATCTTTGGAAGGGAGACAAATGTCACTATGCAGATCGATGTCCAGGGTTAATGTTAATAGTACTGGAACGGTTTCTATGTCACATTCTGATCTATCTGATCTGGATATGATCACAGATGACGGTTATTCTCCTGCATCTGATGTGGACAACCTGAACCTGACTGAGACTGCCAGAGACTCTTTGCCATCAGCTGGGGCTGTGGTAATTGAAGCTGGAAAGAAAGGAGAGGAACTAATTCAAAAATGGATCCGTGTTCAAGAATACGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAAAAGGTCTTATCTAGACTCTCTTGCCAGATGTAAGAGTTGTCATGATCTATACTGGAGAGATGAGAGACATTGTAAAATTTGCCATATGACATTTGAGCTTGATTTTGATCTAGAAGAAAGATATGCAATTCACATAGCCACATGCAGAGAGAAAGAAGACGGTAGTACATTTCCTAATCATAAAGTGTTATCATCACAGATTCAATCACTAAAAGCTGCAGTTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAAACTATGGGTGAAACGGCTCAGACGCACCTCAACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAACAATAACTGGTTGTTTCAATGCAAATTTCCGGACGGTGTGGTTGAAGAAATTATTGCATCTTTTGCATCCATGCCCCACACATCATCTGCCCTTGCTTTGTGGTTAGTGAAGTTGGATGCCATAATCGCTCCCTACCTGGACAGAGTCCATCCTCTGAAGAAGCAAGGAACCAGTCAACATGGTCCTTGGCGATAGGTGTACTACGATTGTTTAAGGGCGTGCATATACTGAAATTGATGAAGGAACTACCTGTTCTGCCTGCTTGACTCCCGGATGGATTTATCTTGATCAGAGATTCTTGTGTTGGCTTCACTTGGTTCTGAATTTTTAGTATCACGACAATTTGACCAAGGCAAATGCTGCGGATGTCAAAATCCTAGTTTTTTTTTTGTCATTCTCCCCATCCCGATTTGTACAAGCCATCCTGTTTGTCAGATGTATAGGTTTACATTTTTTCCATATAAAAAGAAATACTAGGTAGCTCGAGTTTTTTGGTTCGTAATGCCACTTGGTTTCTACCAGGTCACCCATTTTTCTGGCTTAATGATGTTTGTGGTC 3729 0.4033 PKPYFSWHIILTSHHTYATSLTHFLSSLSFHISGNVECQSCNRDCDSYIAHQDKGGNGVIVPSYTLSRHEFRVCGGKGLSRVAAAARNGSSTSAYDMAVATNVKKKQKRKCLQELFTTDYIVNKVLRKDGPPLGQEFDFLPSGPKYFTSACEEDQGSSQRRKVSKSAIQSLTNCSMKTPVKKHGTGKGLMTVWRATNPDAGDLPIGFGVAGQEVPLISNSTREKPVYENSRLSKKVNRNGMPKNKMQNKRNKLQDKKKLPIKRGVGELNLYVTQNQSPKEKCGLAFDNAISEEGVDRVSMLIDDEELELRDLQEGTNLFMCSDHLAASGMLGCSLCKDVLVKFPPDTVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYAIVVDICPFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIEVELTNGFSPHLNKSCNFLALLHSVESQEFSPDFWKRSLNSLTWIEILRQVLVASGFGSKQGSLRREVLSKELNLLVNYGLCPGTLKTELFNILSERGNIGCKVTDLAKSMQVAELNLASTTEELESLICSTLSSDITLFEKISSTAYRLRMSTVMKDSDESHSDTEDSGSVDDELNDTDMSSSGDDFESDSIKSSIRKLKRANSHRNNMLKVYTEIDESHPGEAWLLGLMESEYSDLNIEEKLNALAALTDLVSSGSSIRLKDSTKVTADCNSSIQLRGSGAKIKRSVVKKPGPLWNQKVKLNSDPCTVDSSPLISRFNSREGSSGKGKGSSILHPIQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRIYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLEGRQMSLCRSMSRVNVNSTGTVSMSHSDLSDLDMITDDGYSPASDVDNLNLTETARDSLPSAGAVVIEAGKKGEELIQKWIRVQEYDSWIWNSFYLDLNVVKYGKRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKEDGSTFPNHKVLSSQIQSLKAAVYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINNNWLFQCKFPDGVVEEIIASFASMPHTSSALALWLVKLDAIIAPYLDRVHPLKKQGTSQHGPWR 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00658 1121 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 759 830 IPR028941 -
Pste3g00658 1121 PANTHER HOMEOBOX PROTEIN SIX 254 1107 - -
Pste3g00658 1121 MobiDBLite consensus disorder prediction 575 590 - -
Pste3g00658 1121 ProSiteProfiles DDT domain profile. 363 422 IPR018501 -
Pste3g00658 1121 MobiDBLite consensus disorder prediction 591 605 - -
Pste3g00658 1121 Pfam DDT domain 366 419 IPR018501 -
Pste3g00658 1121 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 642 681 IPR028942 -
Pste3g00658 1121 SMART testlast3 363 422 IPR018501 -
Pste3g00658 1121 MobiDBLite consensus disorder prediction 575 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00658 Pste-Chr3 4117869 4133350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00658 285 1110 Homeobox Transcription Factor Family AT5G44180 25.050 3.52e-66 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pste3g00658 WSD 3e-13 No_clan