Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00656 GAGCAGCAGAAAATAGAAGGATTTTCATGAGGTAGAAAAGGGATTGACGAGTTCAATTGTCTTTGCGTTTCAGTGCACTGATGGCTTTATCCCTACCAACCCAATGTCCTCATACCGTCAACCCTCTCCGACGATCCCCAAAACCCGCCCTCCTCCGCCGCCTCAACCACCGCGTTTGCGTGGTCAGCGCCGCCACTCCCCTCCTCCAAGTCAATGACCTAAAGGCTAAGATTGTCGAATCCAACGTCGAGATTCTCCACGGTGTTAACCTCACCGTTAACCAAGGAGAGGTCCACGCCATCATGGGAAAAAACGGTTCTGGCAAAAGCACTTTCGCTAAGGTTCTTGTGGGGCACCCGGATTATGAAGTAACCGGAGGTAGCGTTGTGTTCAAAGGGGAGAATTTGCTTGAGATGGAACCTGAAGAAAGATCTCTCGCGGGTCTCTTCATGAGTTTCCAATCCCCTGTTGAAATTCCCGGTGTTTCCAATGATGAGTTTCTTGTTATGGCCTACAATGCTCGAAGAAAAAAACTTGGTCTACCCGAGCTTGGGCCTCTTGAGTGTTTTTCTTACCTGATGGAGAAGCTTCAGCTTGTTAACATGAAGCCTGACTTTCTCAATAGAAATGTGAACGAAGGGTTTAGTGGCGGTGAACGCAAGCGCAATGAAATCTTGCAGCTTGCAGTTTTGGGGGCAGACTTGGCTATTTTGGATGAGATTGATTCTGGGTTGGATGTTGATGCGCTCAGGGATGTTGCCAATGCAGTTAATCAGATTCTCACCCCAGAAAATTCTTTGTTGATGATAACTCATTATAGACGGATTCTGGATCTTTTGAATCCTACACATGTCCATGTTATGGACAAAGGGAAAATTGCAAGAACAGGTGACCTATCAATGGTAGAAGCTATTGAGGCAGAGGGATATGAAACAGTCTCTTCTTTAACATAACACCGCTAGTATTGTCTTACAGATACGCCTTACTCAAGTAAAATCCTGGAAGATAAGAACACTTTAAACGTCAAATCTCTTTGCATCAACATTAGTCTCAATATCACCAGTAGTCAGTACGAATAAGGAGCAGAAAAACATTATCTACGTAGAGTTAAGTTCAGGTGCACTACCAGGAATATATGCAGAATGCAGTGTTATTAAAGTGAGGTAGTTGCGGTAATATTCTGATGGCTCCTTTCATCATTATTGTTTCCAAATGGAAACGAGAAAACAGACTGTCTAAAGCTCATGTTGGCAGATGTTGATGTTGCTTTACTCGGGACATATATTCTTCTGGGCATTATTTTCTTAGGCTTTGATAGACACGTATCGAAACTATTGAATTATGATGTATTTACCAACTAAATGGTGAATTTGAAAATTTCTATTTTCGTTTTTGTTTTGCATTGTTAATTATCTACTTTTGGATCACGAATGCTAACTTTGCTGCATTAGCCGTAAGGATTACAATATATGTCAATCTACATTTAGTTTTGGTACGTA 1499 0.4216 MALSLPTQCPHTVNPLRRSPKPALLRRLNHRVCVVSAATPLLQVNDLKAKIVESNVEILHGVNLTVNQGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVSNDEFLVMAYNARRKKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNQILTPENSLLMITHYRRILDLLNPTHVHVMDKGKIARTGDLSMVEAIEAEGYETVSSLT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00656 290 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Pste3g00656 290 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 31 288 IPR010230 GO:0005524
Pste3g00656 290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 288 IPR003439 GO:0005524
Pste3g00656 290 SMART AAA_5 68 265 IPR003593 GO:0016887
Pste3g00656 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 273 IPR027417 -
Pste3g00656 290 Pfam ABC transporter 59 213 IPR003439 GO:0005524
Pste3g00656 290 NCBIfam Fe-S cluster assembly ATPase SufC 42 285 IPR010230 GO:0005524
Pste3g00656 290 Gene3D - 41 289 IPR027417 -
Pste3g00656 290 CDD ABC_FeS_Assembly 42 283 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00656 Pste-Chr3 4111588 4116654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00656 55 273 Calmodulin-binding Proteins AT2G36910 24.138 7.52e-08 51.6