Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00645 GCAAGGTAATTAAGCACAGAAAAAGAAACAAAAATGGGTTCTATTGGTAACATTGTAGAGGAAAACAACGATGCATGCATTTCTGCATTGCAAGTGTGCTTTGGTCCAGTTTATTCAGCAGTGTTGAATGCTGCCATTGAACTCAACTTGTTTGATATCATAGCAAAGGCATCATCACCATTTGGTGTCTCTGCTTCTGATATTGCTTCTCAGCTTCCAAAACAGCACCCTGAACTCCCACGTAGGCTTGATCGCATGCTGTGTTTACTTGTCACTCACTCTCTTCTTGAGTGTTCCACTCACACCAATCAAAATGGTGTTTCTGAAAGGCTTTTCAAGCTATCACCCTCTGGTCATTACTTTGTCAAAGTAGATAATAAGAGCTCTTTGGCTTTTCTATCATCATTTTTGAGTCATCGAGCCATTGTGGATGTCTTCCTCAACTATAAGGAGATACTTCTGGACTTTGACAAGGGTGTATACGAGAAAGTTCATGGAATACCTATCTATGAAGGCATACCATTAGATCCAACATTGAACAATGTTTTCAATGCAGCAATGGCTAATCTGTGCACAATCCAGATGGAGAAGGTGCTTGAAATATATAAAGGATTTGAAGGAATATCGTTGCTAGTTGATGTGGCCGGTGGCATTGGCCGAAATTTGAATATGATAATCTCTAAATATCCTTCCATAAAGGGTATTAACTTTGATCTGCCCCATGTGATACAAAATGCTCCAACTTATCCAGGTATATACATATATTTGGATAAAAAACTTGGAGGAAACATGTTTGAAGGTGTTCCAAAGGGTGGTGATGCTATCATGTTGAAGGCAGTATTGCACAATTGGTCTGATGAACAATGTTTAAAAATTTTACGGAATTGTTACAATGCTTTGCCACAAAATGGGAAGTTAATCCTTGTGGAAACCATCATGCCTGAAGAGATTCACTCTACAGAAGCAGCTAAAGTGGTTGTTGGCTCTGACAACATCATGTTGGATGGTGGCCTTGAAAAAACTCAGAAAGAATTTGAGAGTCTATGCAAACGCTCTGGGTTTTCTGATTTTCAAGTGGTTGGTTGTGTCTTATATGGTATTGGTATCATGGAGTTTCAGAAGTGAATAATGCTAATTAAGTTTAGTGTCTTAATCATGAGGATCTCATAAATATCTAATTGTACTAGTGATGGTCCAAAAATAGATCATAGCTATGCACTTACGAAAAAATGTGCATACAAATGTTAAATAAATGGTCTAGTATTAAAATTTTTTATTTTCATAAGTATTTTTATTGAAAAATTTTATCTGCCTCTATATATTAGA 1326 0.368 MGSIGNIVEENNDACISALQVCFGPVYSAVLNAAIELNLFDIIAKASSPFGVSASDIASQLPKQHPELPRRLDRMLCLLVTHSLLECSTHTNQNGVSERLFKLSPSGHYFVKVDNKSSLAFLSSFLSHRAIVDVFLNYKEILLDFDKGVYEKVHGIPIYEGIPLDPTLNNVFNAAMANLCTIQMEKVLEIYKGFEGISLLVDVAGGIGRNLNMIISKYPSIKGINFDLPHVIQNAPTYPGIYIYLDKKLGGNMFEGVPKGGDAIMLKAVLHNWSDEQCLKILRNCYNALPQNGKLILVETIMPEEIHSTEAAKVVVGSDNIMLDGGLEKTQKEFESLCKRSGFSDFQVVGCVLYGIGIMEFQK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00645 363 PIRSF O-mtase 4 363 IPR016461 GO:0008168
Pste3g00645 363 PANTHER O-METHYLTRANSFERASE 28 346 IPR016461 GO:0008168
Pste3g00645 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Pste3g00645 363 Pfam O-methyltransferase domain 148 344 IPR001077 GO:0008171
Pste3g00645 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 351 IPR029063 -
Pste3g00645 363 Gene3D Vaccinia Virus protein VP39 169 351 IPR029063 -
Pste3g00645 363 Gene3D - 26 187 IPR036388 -
Pste3g00645 363 Pfam Dimerisation domain 30 80 IPR012967 GO:0046983
Pste3g00645 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 363 IPR016461 GO:0008168
Pste3g00645 363 FunFam Caffeic acid 3-O-methyltransferase 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00645 Pste-Chr3 4036814 4039612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00645 11 363 Monolignol Biosynthesis Gene Families AT5G54160 44.818 1.08e-99 298