Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00623 ATGAGATCTATTGCCTACTCAAGTGTGAAGTTATGTTTTGGAAGACATCTTCACTACAAGGAATTGTTAGGCCACCCATGGGATGATCATATCCAAATTCTTCCTCTGCTTGGCTCAACAATTGTTGGAATGAAGGATGGCTCAACTTTTGAAGATGCATGGCTTGCTGCAAATGACGCCCTTCTGATACCAGAAGGTGGGGCATGCACTTCTGTTGAACCACCTAATATATGGAGACAATATCATGTGAAGCCATGTACCTTGGGAAGAATGGTTTTCCGCTTAGCAGATATTATTAGAAGGTCATCAGTTTCTACCTCTCCAGCAGCCTCCAAGGGGATTGAAGTACCAAAAGGCTATCTTGCGGTGTATGTTGGGGATAAGATGAGACGGTTTGTAATTCCAGTGTCATACTTGAACCAACCTTCATTTCAAGAATTACTAAGTCAAGCAGAAGAAGAGTTCGGATATGATCATCCAACAGGTGGTCTCACAATTCCTTGCCAGGAGGATGAGTTCCTGACCTCTCGCTTGAATGAGTTGTAA 546 0.4304 MRSIAYSSVKLCFGRHLHYKELLGHPWDDHIQILPLLGSTIVGMKDGSTFEDAWLAANDALLIPEGGACTSVEPPNIWRQYHVKPCTLGRMVFRLADIIRRSSVSTSPAASKGIEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQELLSQAEEEFGYDHPTGGLTIPCQEDEFLTSRLNEL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00623 181 Pfam Auxin responsive protein 101 173 IPR003676 GO:0009733
Pste3g00623 181 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 103 175 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00623 Pste-Chr3 3852401 3853857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00623 115 173 Calmodulin-binding Proteins AT3G43120 57.627 8.18e-19 77.4