Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00620 TCCTCTGAGACATTACCACACCATTTTATAACCAACACAAATCATTCACTCCCTGAAGCATTTAAAATTAGAGGAAATACAATTCAAGGATGGGTTTTCGTTTTCCTAGTGCCCAAGGGCTATCTTGCTGTCTATGTTGGAGAGAAAATGAAGCAATTTATGATTCCCATATCATACTTGATCCATCCTTCATTCCAATACTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATGGGTGGTCTAACAATTCCTTGCAACCCAGCATAAATCATTCTCATCCTGAAGCATTCATCACAAGTGCCAAAGGGCTATCTTGCAGTCTACATTGGAGAGAAAATGAAGCGATTTGTGATCCCATATCGTACCTAACTCATCCTTCGTTCCAAGACTTGTTGGATCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGCTGGAATCAGAAGGGCATCATTTGCAGCAAACTATGCATCTTCAAAATCTGTTGAGGTGCCAAAGGGCTATCTTGCAGTCTACATCGGAGAGAAAATGAAGCGATATGTGATCCCCATATCGTACCTAACTCATCCTTCATTCCAAGACTTGTTGAATCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCTTGCAGTGAAGATGTCTTCCAGAACATAACTTCACACTTGATCTATGTGGGAGAAAATGACTTAAAGAAACGGTTTGTGATTCCTATATCATATTTGAACCAACCTTCAATCCAAGACTTGCTTAGTCAAGCTGAACAAGAATTTGAATTTGATCATCCAATGGGTGGTCTTACAATCCCTTGTAGAGAAGATGTTTTCCTAGATATCACTTCTCGCTTGGATAGAACCAACTCAAATCTTTCTCATCCTGAAGCATTTGAAACTCATACGCGTGAAATATCTACTGTTTTCTACACCATTTTCTTCTCAAGGCAGAGCAAATACAATACAAGAATGGGTTTTCATTTACCTGGTATCAGAAGGGCGTCATTTGCAGCAAGCCATGCATCTTCAAAAGCTGTCGAGGTGCCAAAGGGCTATCTTGCAGTCTACGCTGGAGAGAAAATGAAACGATTTGTGATCCCCATATCATACTTGAGCCATCCTTCATTCCAACAATTGTTGAGCCAAGCAGAGAAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCTTGCAGCGAAGATGTCTTCCAAAACATAACTTCACATTTGAGTGGTCAA 1263 0.4062 SSETLPHHFITNTNHSLPEAFKIRGNTIQGWVFVFLVPKGYLAVYVGEKMKQFMIPISYLIHPSFQYLLSQAEEEFGYDGWSNNSLQPSINHSHPEAFITSAKGLSCSLHWRENEAICDPISYLTHPSFQDLLDQAEEEFGYDHPMGAGIRRASFAANYASSKSVEVPKGYLAVYIGEKMKRYVIPISYLTHPSFQDLLNQAEEEFGYDHPMGGLTIPCSEDVFQNITSHLIYVGENDLKKRFVIPISYLNQPSIQDLLSQAEQEFEFDHPMGGLTIPCREDVFLDITSRLDRTNSNLSHPEAFETHTREISTVFYTIFFSRQSKYNTRMGFHLPGIRRASFAASHASSKAVEVPKGYLAVYAGEKMKRFVIPISYLSHPSFQQLLSQAEKEFGYDHPMGGLTIPCSEDVFQNITSHLSGQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00620 421 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 79 IPR003676 GO:0009733
Pste3g00620 421 Pfam Auxin responsive protein 153 230 IPR003676 GO:0009733
Pste3g00620 421 Pfam Auxin responsive protein 339 417 IPR003676 GO:0009733
Pste3g00620 421 Pfam Auxin responsive protein 37 80 IPR003676 GO:0009733
Pste3g00620 421 Pfam Auxin responsive protein 230 290 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00620 Pste-Chr3 3824693 3840782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00620 37 79 Calmodulin-binding Proteins AT5G20810 62.791 1.44e-11 61.6