Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00619 AACTGGAACACACATCACAGGCAAAGATTTGAAAGAAGTAATAAAGAAGCAAATGATGATTCAAAGAATTCTAGAAGGGTTAATAAGAAGGTTGTTGAAGCTTGGAAGTCTATGACTATTAAAAAATTCATAATGTGGAAAATATTGGTTCACCTCAAGAAGCTAGCTAAGAGAGTTCAAAGGTTCTTGGATGGTTTGAAGAGTTACTTGTTCAAAGCGATTGCAGGACAAGAAGACATGACTTATGAGCAAGCCTTGAATAGGGCTTTGATTGTTGAGTTAGGAAACAAAGATATATGTGGCAATTCTCATTACTCTTGCAAGGGATCCAACATTGAGACATCTCGTGGTGGTCACCAAGGTCATGGTTGCAGAGGTTATAGGGAAGATGTAACTATCGTAGAAATCAACAAAGAGATCTTCAGCCACATGTCACTCAGGAGCACAATGGGTTTCCGCTTAACAGGTATTATTAGAAGGTCATCAGTATCTACCTCTCCAGCAGCATGCAAAGGGGTTGAAGTACCAAAAGGCTATCTTGCAGTGTATGTTGGGGATAAGATGAGACGGTTTGTGATTCCAGTATCATACTTGAATCAACCTTCATTTCAAGAATTACTAAGTCAAGCAGAAGAAGAATTCAGATATGATCATCCAACAGGTGGACTCACAATTCCTTGCCAGGAGGATGAGTTCCTAAATGTGACCTCTCGCTTGAATGAGTTCCACACAAGTCATTGCAATTCAAAAGTATCAGAACTGAAATATTTCTTCCTTGTAGAATATCTTTCACATCAGCTATACAGAACAATGGGTTTCCGCTTAGCTGGTATTATTAGAAGGTCCTCAGTAGCTTCCTCTCAAGCAGCCTGCAAGGGGGTTGAAGTACCAAAAGGCTATCTAGCAGTGTATGTCGGGAATAAGATGCGGAGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTTCAAGTGTTACTATGTCAAGCAGAAGAAGAATTCGGATACGATCATCCAACAGGTGGTCTCACAATTCCATGCCATGAGGATGAGTTCCTAAATGTCACCTCTAGCTTGAATGAGTTAATTGAACTATTTCTTCGTTATAGAATTCCTTTGACATCAGCTATTGTAAACAATGGGTTTCCGCTTAGCAGGTCATCAGTGTCTTTGTCTCAAGCAGCCTGCAAGGTGGCTGAAGTACCAAAAGGCTATCTTGCAGTGTGTGTTGGTGGCGATAAGATGAGGAGGTTTGTGATTCCAATATCAAAGTTGAACAAATCTTCATTTCAAGAATTACTGAGTCAAGCAGAAGAAGAGTTTGGATATGATCATCCAATGGGTAGTCTCACAATTCCATATCTGGAGTTCCTAAATGTCACCTCTCGCCTGAATGAATTAATTCTTTTGACATCAGCTATAGAGAACAATGGGTTTCCGCTTAGCAGAGCATCAGTTTCTACCTCTCATGCAGCTTCCAAGGTGGTTGAAGTACCAAAAGGCTATCTTGCAGTGTATGTTGGTGATAAGATGAGGTGGTTTGTGATTCCAGTAGCATACTTGAACCAACCTTCATTTCAAGAATTACTCAGTCAAGCAGAAGAAGAATTTGATCATCGAAAGGGTGGTCTCACAATTCCATGCCATGAGGATGAGTTCCTAAATGTCACCTCTGGCTTGAATGAG 1689 0.4044 NWNTHHRQRFERSNKEANDDSKNSRRVNKKVVEAWKSMTIKKFIMWKILVHLKKLAKRVQRFLDGLKSYLFKAIAGQEDMTYEQALNRALIVELGNKDICGNSHYSCKGSNIETSRGGHQGHGCRGYREDVTIVEINKEIFSHMSLRSTMGFRLTGIIRRSSVSTSPAACKGVEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQELLSQAEEEFRYDHPTGGLTIPCQEDEFLNVTSRLNEFHTSHCNSKVSELKYFFLVEYLSHQLYRTMGFRLAGIIRRSSVASSQAACKGVEVPKGYLAVYVGNKMRRFVIPVSYLNQPSFQVLLCQAEEEFGYDHPTGGLTIPCHEDEFLNVTSSLNELIELFLRYRIPLTSAIVNNGFPLSRSSVSLSQAACKVAEVPKGYLAVCVGGDKMRRFVIPISKLNKSSFQELLSQAEEEFGYDHPMGSLTIPYLEFLNVTSRLNELILLTSAIENNGFPLSRASVSTSHAASKVVEVPKGYLAVYVGDKMRWFVIPVAYLNQPSFQELLSQAEEEFDHRKGGLTIPCHEDEFLNVTSGLNE 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00619 563 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g00619 563 Pfam Auxin responsive protein 488 559 IPR003676 GO:0009733
Pste3g00619 563 Pfam Auxin responsive protein 160 238 IPR003676 GO:0009733
Pste3g00619 563 Pfam Auxin responsive protein 390 455 IPR003676 GO:0009733
Pste3g00619 563 Pfam Auxin responsive protein 280 360 IPR003676 GO:0009733
Pste3g00619 563 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 399 465 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00619 Pste-Chr3 3823780 3849903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00619 488 554 Calmodulin-binding Proteins AT3G43120 49.275 3.06e-13 66.2