Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00618 GTTACACTAGCAAATTGGAAACATGCAAAGGAGAGACAAAACCTAAAATAGAAAACAAAACACACACCATGGATTCGAATGATGAAGCGATTCTTCTTCCAAAATCTTCACCTCACGAAGACAAAGCATGTCTATCTGCCATGATACTCAGCTTCAGCCCAATGGCAAGCCCACCAGGCATGTCAGCCTCTAAGATTGCTTCACAACTTCCAATATTTCAACACAAAAAGTTGCCCCAAAGGCTTGATCGCATGCTATGTCTTCTTGCAAGTCACTCTCTTCTTACTTGTAACACACTCACTAATGAAGTGGGAAATAGGGTTGAAAGACTCTATGAACTTTCACCATCGGGCAAGTACTTTGTGAAAGATGAATCCACTCCCTCAATGGCCTTGTTCTCAAGCCTTAATTTCAAGGAGATACTTCTTGACTGTGATAATGGCCTATACATGAAAGTTCATGGAATGTCCATTTATCAAGGCATACAATCTGATCCAGCATGGAATCATATTTTCAATGAAGCAATGGCCAATATATGCACAATAGAGATGACAAAGATACTTGAAATATACAATGGATTTGAAGGAATATCAGTGCTTATTGACGTGGGAGGTGGCATTGGTCAAAGTTTGAATATGATAATCTCCAAGTATCCTTCAATAAAGGGGATTGAGCATGTGCAAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCTATATTATTGAAGGGCATATTGCACAATTGGTCCGATGAGAATTGTTTGAAAATTCTAAACAATTGCTACAAAGCTTTGCCAGAAAATGGTAAGTTGGTAGTTGTAGACTTCGTAATGCCCGAAACAATTCAGTGTACAGAAGCAGATAAAATGGTTACTAGCTTTGACAACCTCATTATGAACAATGGTAAATGGCTTTCTCGGGGAATAGTTACTATTTACTTTATGCTTGTGCACCCTACTAGTATGTTTCACCTTCTCTCTAGATTTACATGTGATATTGACTACTCCTTCTGCTCCTGGCTACGTGTGAATGCCTCCACCCCTTCAAACCCTTCTGATGATGCTATGACTGATACACTTGGATATGCAATTGGACCTTCTGAAGCACATGGAGGATTGAGAGATAATGATTGTGAGGTTCATAACGATATCACAGGGAGTGATCCGTCTGAAGGATCACAG 1184 0.397 MDSNDEAILLPKSSPHEDKACLSAMILSFSPMASPPGMSASKIASQLPIFQHKKLPQRLDRMLCLLASHSLLTCNTLTNEVGNRVERLYELSPSGKYFVKDESTPSMALFSSLNFKEILLDCDNGLYMKVHGMSIYQGIQSDPAWNHIFNEAMANICTIEMTKILEIYNGFEGISVLIDVGGGIGQSLNMIISKYPSIKGIEHVQGDMFESVPKGDAILLKGILHNWSDENCLKILNNCYKALPENGKLVVVDFVMPETIQCTEADKMVTSFDNLIMNNGKWLSRGIVTIYFMLVHPTSMFHLLSRFTCDIDYSFCSWLRVNASTPSNPSDDAMTDTLGYAIGPSEAHGGLRDNDCEVHNDITGSDPSEGSQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00618 372 CDD AdoMet_MTases 199 256 - -
Pste3g00618 372 Gene3D - 37 164 IPR036388 -
Pste3g00618 372 SUPERFAMILY "Winged helix" DNA-binding domain 35 102 IPR036390 -
Pste3g00618 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 279 IPR029063 -
Pste3g00618 372 MobiDBLite consensus disorder prediction 348 372 - -
Pste3g00618 372 PANTHER O-METHYLTRANSFERASE 32 280 IPR016461 GO:0008168
Pste3g00618 372 Gene3D Vaccinia Virus protein VP39 146 280 IPR029063 -
Pste3g00618 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 9 323 IPR016461 GO:0008168
Pste3g00618 372 Pfam O-methyltransferase domain 200 281 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00618 Pste-Chr3 3809005 3818404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00618 38 277 Monolignol Biosynthesis Gene Families AT5G54160 43.446 5.14e-67 214