Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00617 ATGAAAAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGATCTAGGCCAAAGATTCTGCGTTTGAATTTGAACAGTTCACCAAATTTGGAACTAAACATGGCTTGTCCATTGACAGTCGCAAGAAACTTTAAAGACAACTCTGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCGGCTAGTAGTCCTGAACAAGGGTCACCACCATTGACTGTAACTGATATCGGAACATCATCCATATCAAGCTCAGATCCTGCAACTTCCCCATTTTTCCACTCTAACAATTATGAAAGACAGAGGAGAGATTTTACCTTTGTTCATGAGGGACTGACCAACCTAGAGGATATTGAGTCTGACTCTGAGAGTGAAAAGCTGAGTATGTCATCTAAGAGTTCTTATTTTCAGCCATGGATTGCAAATGTAATTTGCATGGATGGTGATTTCTCAAAACATGAGGACAACAGGCAAAGATCCAGTGATGACAAGACTCTGGTTTCTGCCTATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATCAAGATCCTATCCTAGGCATGCTTAATTGTAAAATTGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCAATTTCACTGCCTAAAACTTCACCTCCTGGACCTCCCCCATTATGCTCTATTTGTCAGCACAAGGCACCAGTGTTTGGTAATCCACCAAGGTGGTTTACATATGCTGAATTGCAGCTTGCCACAGGTGGATTTTCACAAGCAAACTTCTTGGCTGAAGGTGGATTTGGTTCTGTACACCGTGGCCTCCTACCAGATGGGCAAGTCATTGCTGTCAAGCAGTATAAATTGGCCAGCACTCAAGGAGATAAAGAGTTCTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAACATCGTAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGGATGGAAGGAGATTACTAGTTTATGAATACATCTGCAACGGCTCTCTAGATTCTCATCTCTATAGAGGAAAGCAGAATGTACTGGAATGGTCTGCACGACAAAAAATTGCAGTTGGGGCAGCTCGTGGATTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCACCGTGATATGCGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTAGCTAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCGCCAGAATATGCCCAAAGTGGTCAAGTTACTGAAAAAGCTGACGTGTACTCATTTGGGATAGTATTACTGGAGCTTGTCACAGGACGGAAAGCTGTGGATATAAACCGTCCCAAGGGCCAGCAATGCCTAAGTGAATGGGCACGACCATTGCTTGAAAAACAAGCCATTTATAAACTAGTTGATCCGAGCCTAAGGAACTGCTATGTTGATCAAGAACTTTATCGTATGCTGCAATGTTCCTCTCTGTGCATCGGAAGGGATCCTCATTTAAGGCCTCGAATGTCTCAGGTGCTCAGAATGCTGGAAGGTGACATTCTTATGTGATTGCTTATCTCATTTCTATTTCCCAACATCATTAGTGTAAAGCTAGAAGATAAAGAAGGATGAATAGAAGCCTGTGGAGTGGAGGGTGCACAAGTTTAAAGCTTCTGTTCTGGCAGATTCTTCTGAATTTCCTTTTGTAAAAAGCTTGCTCCTACATTTTTATGCTGTAAATATTGTCTTTCGATTTTGAGGAGAGGAGAGGACGGTATTGGTAAGGTAATTCCAACTCGTGTTGATTGTTTAGTTCATTGTATAGAAAAACATTCCATTCCAGTTTTGGTTAACCCTTTCTTCCTGGTGTCAAGCAATTTGAATTTTAATTTGTAAAAGAATCCACAAGTGGTTGTGCATGTGAAACCAATAATTGTAGCTGTATCAGTTACTCAAGGGACAAACAACCTTGCAATTCTGTACAATTACTTAACCACTGCAATATTTGT 2027 0.4139 MKKYCMEQLHCNIVIMKRSRPKILRLNLNSSPNLELNMACPLTVARNFKDNSEHADIIRGPAVTPASSPEQGSPPLTVTDIGTSSISSSDPATSPFFHSNNYERQRRDFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNRQRSSDDKTLVSAYEALLQKFSKLDQDPILGMLNCKIDVNLSKSVREAISLPKTSPPGPPPLCSICQHKAPVFGNPPRWFTYAELQLATGGFSQANFLAEGGFGSVHRGLLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYRGKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQVTEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNCYVDQELYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILM 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00617 528 Gene3D Transferase(Phosphotransferase) domain 1 328 526 - -
Pste3g00617 528 CDD STKc_IRAK 258 524 - -
Pste3g00617 528 ProSiteProfiles Protein kinase domain profile. 252 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00617 528 MobiDBLite consensus disorder prediction 61 99 - -
Pste3g00617 528 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 224 327 - -
Pste3g00617 528 Gene3D Phosphorylase Kinase; domain 1 224 327 - -
Pste3g00617 528 SUPERFAMILY Protein kinase-like (PK-like) 232 523 IPR011009 -
Pste3g00617 528 ProSitePatterns Tyrosine protein kinases specific active-site signature. 373 385 IPR008266 GO:0004672|GO:0006468
Pste3g00617 528 PANTHER OS01G0750732 PROTEIN 77 526 - -
Pste3g00617 528 MobiDBLite consensus disorder prediction 66 99 - -
Pste3g00617 528 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 328 528 - -
Pste3g00617 528 Pfam Protein tyrosine and serine/threonine kinase 256 522 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00617 Pste-Chr3 3808753 3811794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00617 214 518 Trihelix Transcription Factor Family AT1G68690 50.809 1.60e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pste3g00617 PK_Tyr_Ser-Thr 2.1e-42 CL0016