Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00611 TCCAATTCAAATCATTCACATTCTGAATCATTTGAAACTCATAACCCTGAACTTCCAAGTGTTCTCCACACCATTTTCTTCTCAAGTCCGAGCAAATACAATACAAGAATGGGTTTCCGTTTACCCAGTATCAGAAGGGCATCATTTGCAGCAAACTATGCATCTTCAAAAGCTGCTGAGGTGCCAAAGGGCTGTCTTGCAGTATATGTTGGAGAGAAAATGAAGCGATTTATAATCCCTATATCGTACTTGACACACCCTTCATTCCAAGACTTTTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCTCTGCAGCGAAGATGTCTTCCAAAATATAACTTCACAATTGACTCATAATCCTGTACTTTTAAGGCTGTTTTTCACCATTTTCTTCTCAAGTCTCAGCAAATACAGTACAAGGATGGGTTTTCGTTTACCCAGTATCAGAAGGGCATCACAAGCTTCTTCAAAAGCAGCGGAGGTGCGAAAGGGATATCTGGCAGTCTATGTTGGAGAGAAAATGAAGCGATTCGTGATCCCTGTATCACACATAATCCATCCTTCATTCCAAGAGTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCTTGCAGCGAAGATGTCTTCCAAAACATAATTTCACACTTGACATTTTCTTCTCAAGTCTCCGAGGTAGTCTATGTTGGACAGAAAATGAGGCGATTTATGATCCTTATATCATACTTAGTCCATCCTTCATTCCAAGAGTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCCTGCAGCAAAGATTATCAAAAGCGCATCAAGTGTAGAAAAGCAAGCTTCTTCAAAAGCAGTGGAAGTGTCAAAAGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGTTTTGTCATCCCATATCATACTTGATCCAGCCTTTATTCCAAGAATTGTTGAGTCAGGCAGAGGAAGAATTTCGATATGATCATCCCATGGGTGGTCTAACAATTCCCTGCAATGAAGATGTCTTCCAAAACCTAACTTCACACTTGAGT 1125 0.4071 SNSNHSHSESFETHNPELPSVLHTIFFSSPSKYNTRMGFRLPSIRRASFAANYASSKAAEVPKGCLAVYVGEKMKRFIIPISYLTHPSFQDFLSQAEEEFGYDHPMGGLTILCSEDVFQNITSQLTHNPVLLRLFFTIFFSSLSKYSTRMGFRLPSIRRASQASSKAAEVRKGYLAVYVGEKMKRFVIPVSHIIHPSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFQNIISHLTFSSQVSEVVYVGQKMRRFMILISYLVHPSFQELLSQAEEEFGYDHPMGGLTIPCSKDYQKRIKCRKASFFKSSGSVKRLSCSLCWRENEAFCHPISYLIQPLFQELLSQAEEEFRYDHPMGGLTIPCNEDVFQNLTSHLS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00611 375 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 243 296 IPR003676 GO:0009733
Pste3g00611 375 Pfam Auxin responsive protein 156 233 IPR003676 GO:0009733
Pste3g00611 375 Pfam Auxin responsive protein 295 372 IPR003676 GO:0009733
Pste3g00611 375 Pfam Auxin responsive protein 45 123 IPR003676 GO:0009733
Pste3g00611 375 Pfam Auxin responsive protein 243 295 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00611 Pste-Chr3 3766016 3780391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00611 243 299 Calmodulin-binding Proteins AT5G20810 51.724 1.13e-10 58.5