Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00610 ACCCAAGTCAATCCATTCTTCAAGAATCAGAATTCAAATATTTATTTGTCTGTACAAGTTCTTTGGCATCAGTATATTATTTGTCTAATTGAGCAACAGAAAACAATGGGTTTTCGCATAGCAGGTATTATTAAAAGGGCGTCATTTTCAACAACCCTTGCAGCCTCCAAGGGGAGTGAAGTACCAAAAGGTTTTCTTGCAGTCTATGTTGGAGATAAAATGAGACGGTTTGTGATTCCAGTATCATACCTGAACCAACCTTCATTTCAAGAATTACTATGTCAAGCAGAAGAACAATTTGGATATGATCATCCAACAGGTGGTCTCACAATTCCATGCCAAGAAGATGAGTTCTTAAATATCACCTCTCGCTTGAATGAGCTATACACCATTTTTTTGGTTCTCAAGCAGTACAAGCACACAATTCAAGTCATTTCATTCCACAAGTATTCCAATTTCAATATTTCTTTCCATAGAATTCCCAGAGATATAGAGAGCAATGGGTTTCCGCTTAGCAGACGGGCATCGGTTTCTACCACCCAAGCAGCATCCCAGTGGGTTCAAGTACCAAAAGGCTATCTTGCAGTCTATGATTTACTAAGTCAAGCAGAAGAAGAATTCGGATATTATCATCCCACGGGTGGTCTCACAATTCCATGCCAGGAAGATGAGTTCCTAAATCAACACAACCACACAATTCAAGTCATTTCATTCCATAAGTATTCCAATTTCAATATTTCTTTCCATAGAATTCCCAGAGATATAGAGAGCAATGGGTTTCCGCTTAGCAGACGGGCATCGGTTTCTACCACCCAAGCAGCATCCCAGTGGGTTCAAGTACCAAAAGGCTATCTTGCAGTCTATGTTGGGAATAAGATGAGGCGATTTGTGATTCCAATATCATACTTGAACCAACCTTTATTTCAGGATTTACTAAGTCAAGCAGAAGAAGAATTCGGATATTATCATCCAACGGGTGGTCTCACAATTCCATGCCAGGAAGATGAGTTCCTAAATGTCACCTCTCACTTGAATGATTTAATTCCTTTGACATTAGCTATAAACAAAAATGGGTTTCCGTTTCGCAGAGCATCGATTTCTACCTCTCAAGCAGCATCCAAAGGGATTGAAGTTCCAAAAGGCTATCTTGCAGTGTATGTTGGGGATAACATGAGGAGGTTTGTGATTCCAGTATCATACTTGAATCAACCTTCATTTCAAGAATTACTAAGTCAAGCAGAAGAAAAATTCGGATATAACCATCCAACAGGTTGTCTCACAATTCCATGCAAGGAGGATGAGTTCCGAAATGTCACCTCTTGCTTATTATCAATACCCAGAAATAGAGAACATACAATGGCTTTCCGCTTAGCAGGTATTATAAGACGGGTATTGTTTTCTCCCACCCAAGCTACTTCCAAGGAGGTTCAAGTACCGAAAGGTTATCTTGCAGTCTATGTCGAGAATAAGATGAGTCAAGCAAAAGAAGAATTCGGATATTATCATCCAAGGGGTGGTCTCACAGTTCCATGCCAGAAAAATGAGTTCCTAAATGTCACCTCTCACTTGAATGATTTG 1578 0.3973 TQVNPFFKNQNSNIYLSVQVLWHQYIICLIEQQKTMGFRIAGIIKRASFSTTLAASKGSEVPKGFLAVYVGDKMRRFVIPVSYLNQPSFQELLCQAEEQFGYDHPTGGLTIPCQEDEFLNITSRLNELYTIFLVLKQYKHTIQVISFHKYSNFNISFHRIPRDIESNGFPLSRRASVSTTQAASQWVQVPKGYLAVYDLLSQAEEEFGYYHPTGGLTIPCQEDEFLNQHNHTIQVISFHKYSNFNISFHRIPRDIESNGFPLSRRASVSTTQAASQWVQVPKGYLAVYVGNKMRRFVIPISYLNQPLFQDLLSQAEEEFGYYHPTGGLTIPCQEDEFLNVTSHLNDLIPLTLAINKNGFPFRRASISTSQAASKGIEVPKGYLAVYVGDNMRRFVIPVSYLNQPSFQELLSQAEEKFGYNHPTGCLTIPCKEDEFRNVTSCLLSIPRNREHTMAFRLAGIIRRVLFSPTQATSKEVQVPKGYLAVYVENKMSQAKEEFGYYHPRGGLTVPCQKNEFLNVTSHLNDL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00610 526 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 198 228 IPR003676 GO:0009733
Pste3g00610 526 Pfam Auxin responsive protein 46 124 IPR003676 GO:0009733
Pste3g00610 526 Pfam Auxin responsive protein 265 342 IPR003676 GO:0009733
Pste3g00610 526 Pfam Auxin responsive protein 364 442 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00610 Pste-Chr3 3760554 3779183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00610 367 448 Calmodulin-binding Proteins AT3G43120 43.902 3.97e-19 82.8