Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00605 ATGCCTGTACAGGAAAATACCATGTCACACAACACTGCTCCTGACGAAAGACTTACGGGAGTAGGAGAACTCATAAATGAAGCTGATCTAACTAAAGAAATTGCCGAACTTGTTGTGAAAAGATTGAATAATAAACCCTGGGTTATCTCGGAAAAGCTTGTGGGAATTGACGAAATACTTGAAGAACTAGAAGCATTGATACGCAAAGAGCCCAAAGACACCAGGTTAATTGGAATTTGGGGCATGGGTGGCATCGGAAAAACAACCCTCGCAGAAGAAATATTTGGAAAACTAAGGTTTGAATATCAAGGTTCTTATCTTTTGCGCGACGTAACTAAGGAAGCATCATGCGGAATAAGTTCTTTAAGAAAAGACATTATATCTGGTCTCTTAGGAAAATATGTGACTGATGATAGAATTTGTGGAATGAAGGTTCTCATTGTTCTTGACGATGTGAATGATTTATGTCTCCTTGAAAAATTATTGGGAAGAGATTATCAGACAAAATTTGCATCAGGTAGTAGAATAATTGTGACTTCTAGAGACAAGCAAGTTCTTATTGCTAACAAAGTCGAGGATGATAATATATATGAACTTAGAGAATTAAATCTTGATAAAGCAGTTGAACTTTTCAATTTGAATGCCTTTGATCACAATGATCTTCAAAGTGGCCTTCAAAGCGAGTTCCATGAGCTATCAACACAGATGGTCGAATATGCCAAAGGCATTCCTTTAGTTCTAGAAGTTGTGGCTCGTCTTCTTCGTGGAAAAAAAGAAAAGGATATTTGGAAAAGTTTGCTACACAAGATTAAAACAGAGCCTGTAAAAGAAGTTCATGCCCTGTTGAAATTGAGTTATGATAACTTAGATCGCAAGGAGAAACAGATTTTTCTTGATCTTGCATGTTTTATTGTTAGATTGTATAGAAAGGTAAATCTTGGCGTTCTAAAATCATTATTGAAAGATGGTAAAAACGATAATTCAGTTGATGCGGATTTGGAAAGGCTGAAAGATAAAGCTCTTATAACTTTCTCAAAGGATAATTTTATATCTATGCATGATTGTATACAAGCCATGGGTTTGGAAATTGTTCGTGAATGCCATCACAACAATGATCTAGGACCTTACACTTGGTTCTGGGACACCGGTGACTTTTGTAAGGCATTGAAAGATGACAAGGGTGTTGAGATCATTAGAAGCATACAAATTGATTTAACAACAACTCAAGTGCAAACGTTTAGCCATGACACATTTACTAAGATGAGAGAACTGCAACTTCTGGATATTTATAGTGGTTGCAATCAAAATAATGTTCTAACTGGAGAAGGGCTTCTATCTCTGCAAAGTGAACTAAGATTTCTTTGTTGCTATTGTTGCTCTTTGAAATGTTTGCCGGAGAATTTTAAAGTCGAGAAGCTTGTAATATTGAAATTGCCATTCAGCAAACTGGAAAAACTTTGGGATGGAGTGAAGAATCTGGTCAATTTAAAGGAACTAGACATCAATAGCTCCCAGGAATTAAAGGAATTGCCTGATTTATCAAAAGCCGCTAATCTTGAAGTATTGATTCTCTTGGGATGTGTAAGGTTGAGTAGGCTGCATCCATCTATTTTCTCTCTTTCCAAACTTGGGAAATTGGACCTTTGGGACTGCAATTCTCTCGACATACTTGGAACCTATTATCATCTACGCGGCCTCAAATATCTTAACCATGATGAGTTGAAGAATTTTAGGGAATTTGAATTGATATTAGAGATTCGGCCAATACGAATTTCACCCTTTTCAAGAAATCATGACCAGAGGAGTTCAATATATGTAAGAAATGACCTCGAGAGGTTGCCTTCAGTCTTGTACAATCTTACACGATTGCTACGTTTAGAGGTGACTCATTGCAGTATGCTTCAAACAATGCCAAAGCTTCCCCTGGGCCTTGAAACTCTATATGTCATGTTTTGTGACTCACTTCAAAGCCTACCAGACCTTTCCCCATGTCTTGAAACTCTAGATGTCAAGGGCTGTGAAGCACTTCAAACTCTACCCGAGTTTCCTCAATCCCTTAAAACCGTGAGAATTGAGTCTTGCAGATCACTACAAAGTATACCAGACCTTCCCCCATATCTTGAAAGTCTAGAGGTCATGGGCTGTGAAGCACTTCAAACTCTATTCAAGTTTCCTCAGTCCCTTAAAAGAGGGAGAATTGAGTCTTGCGAATCACTACAAAATATACAAGACCTTCCCCGGTCCCTTACAACACTAAATTTCAAGTCCTGTAAATCACTCCAAAATCTACCAATCCTTTCCCCGTGTATCGGAAAACTGGATATCATACGCTGTGAAGCACTCCAGACTCTACCAAAGCTTCCTCATCACCTTCGAACTCTAGATGTCATGGGTTGTAAAACACTTCAAACAATACCAGATCTTCCTTGTTGCCTTAAAACTCTGATTGCTAAGTCCTGCAAATCACTACAAAGTCTACCAAAGCTTCCTTCTTCGCTTGAAACCCTGACAGTCAAATCCTGCAAATCACTACAAAGTATACCCGAGCTTCCCCTGTCCCTTATATATCTAGATGCAAGCGAGTGTGAAACATTGGAGATTGTATTGTTTCCTTCAACAATTAAAGGATCAAAACGAAAGAAGCGATTTGAATTTTGGAATTGCTGGAACTTGGACGAACATTGCCTGGTGACTATTGGGTTGAACGCACAAAGGAATATGAAATCCGCATATAATCCCCTTTTTTTTGGATATCCAGGAAGCAGTGTTCCAGAATGGTTGTTGTATAAGACAACAGATAATTATATAATTATTGAAGATTTCCCTTCTACATCATCACACGCAATTGGCTTCATTTTCTGCGTCATCTTTGGTAAAGGAAAAACGGCCGATGTAAAAGTTACCATGACTGTAACAGATGGTAACTATCTAGTCCAACATGAAAGTGCTAGATTATACGTGAGATCTGAAAATATTGAGTCAGATCATGTGTGCGTGATCTGCGACAATAGTTACCTAATTTGTACAGCCCAAACTAAAACAAGGTTTAAAATCCGATTAGATGCAGAAGCCTTTGGAGGTGAAGGGCTGCAGGCAGACTTAAAAGGATTTGGGGCAAGCCCAATACACATCCCCTGGGAGGCTGGGACAGATCAACGACGTCAACGACATCTCCATGCTGATGATTACTTTTTTGGACGACTCTGTCCAAGCCCCTAAATGGAGAATCCGAAGAAATGTGTTTGCAAACCAAAAAAATCACAGTTTCCTTCGGACTTAAGCTGCAGCAGAGCTGATCATGCTCGTGCTAACAATCAGTTTTACATAATAGTATACAGCAAATGGGATTGGAAATTGTTCATCAGAGCTTCAACAAAATCTACAACATTTCACTTGGTTGTGGGATACCAATGACTTTTGTGAAGCATTGACAGATTACAAGGT 3444 0.3868 MPVQENTMSHNTAPDERLTGVGELINEADLTKEIAELVVKRLNNKPWVISEKLVGIDEILEELEALIRKEPKDTRLIGIWGMGGIGKTTLAEEIFGKLRFEYQGSYLLRDVTKEASCGISSLRKDIISGLLGKYVTDDRICGMKVLIVLDDVNDLCLLEKLLGRDYQTKFASGSRIIVTSRDKQVLIANKVEDDNIYELRELNLDKAVELFNLNAFDHNDLQSGLQSEFHELSTQMVEYAKGIPLVLEVVARLLRGKKEKDIWKSLLHKIKTEPVKEVHALLKLSYDNLDRKEKQIFLDLACFIVRLYRKVNLGVLKSLLKDGKNDNSVDADLERLKDKALITFSKDNFISMHDCIQAMGLEIVRECHHNNDLGPYTWFWDTGDFCKALKDDKGVEIIRSIQIDLTTTQVQTFSHDTFTKMRELQLLDIYSGCNQNNVLTGEGLLSLQSELRFLCCYCCSLKCLPENFKVEKLVILKLPFSKLEKLWDGVKNLVNLKELDINSSQELKELPDLSKAANLEVLILLGCVRLSRLHPSIFSLSKLGKLDLWDCNSLDILGTYYHLRGLKYLNHDELKNFREFELILEIRPIRISPFSRNHDQRSSIYVRNDLERLPSVLYNLTRLLRLEVTHCSMLQTMPKLPLGLETLYVMFCDSLQSLPDLSPCLETLDVKGCEALQTLPEFPQSLKTVRIESCRSLQSIPDLPPYLESLEVMGCEALQTLFKFPQSLKRGRIESCESLQNIQDLPRSLTTLNFKSCKSLQNLPILSPCIGKLDIIRCEALQTLPKLPHHLRTLDVMGCKTLQTIPDLPCCLKTLIAKSCKSLQSLPKLPSSLETLTVKSCKSLQSIPELPLSLIYLDASECETLEIVLFPSTIKGSKRKKRFEFWNCWNLDEHCLVTIGLNAQRNMKSAYNPLFFGYPGSSVPEWLLYKTTDNYIIIEDFPSTSSHAIGFIFCVIFGKGKTADVKVTMTVTDGNYLVQHESARLYVRSENIESDHVCVICDNSYLICTAQTKTRFKIRLDAEAFGGEGLQADLKGFGASPIHIPWEAGTDQRRQRHLHADDYFFGRLCPSP 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00605 1072 Gene3D - 286 360 IPR036388 -
Pste3g00605 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 300 IPR027417 -
Pste3g00605 1072 Coils Coil 25 45 - -
Pste3g00605 1072 Pfam Leucine Rich Repeat 472 491 IPR011713 -
Pste3g00605 1072 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 640 IPR044974 GO:0006952
Pste3g00605 1072 SUPERFAMILY L domain-like 403 808 - -
Pste3g00605 1072 Gene3D - 39 196 IPR027417 -
Pste3g00605 1072 PRINTS Disease resistance protein signature 139 153 - -
Pste3g00605 1072 PRINTS Disease resistance protein signature 240 254 - -
Pste3g00605 1072 PRINTS Disease resistance protein signature 491 507 - -
Pste3g00605 1072 PRINTS Disease resistance protein signature 76 91 - -
Pste3g00605 1072 SMART LRR_bac_2 683 703 - -
Pste3g00605 1072 SMART LRR_bac_2 662 682 - -
Pste3g00605 1072 SMART LRR_bac_2 641 661 - -
Pste3g00605 1072 SMART LRR_bac_2 830 850 - -
Pste3g00605 1072 SMART LRR_bac_2 493 513 - -
Pste3g00605 1072 SMART LRR_bac_2 448 467 - -
Pste3g00605 1072 SMART LRR_bac_2 788 808 - -
Pste3g00605 1072 Gene3D Ribonuclease Inhibitor 396 591 IPR032675 -
Pste3g00605 1072 Pfam NB-ARC domain 64 289 IPR002182 GO:0043531
Pste3g00605 1072 Gene3D Ribonuclease Inhibitor 598 729 IPR032675 -
Pste3g00605 1072 Gene3D - 201 285 IPR042197 -
Pste3g00605 1072 SUPERFAMILY "Winged helix" DNA-binding domain 277 368 IPR036390 -
Pste3g00605 1072 Gene3D Ribonuclease Inhibitor 730 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00605 Pste-Chr3 3718390 3723715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00605 644 847 WRKY Transcription Factor Family AT5G45050 30.415 4.39e-14 75.5