Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00601 ATGGGTTTCCGTTTACCCAGTATCAGAAGGGCATCTGCAAACCATGGATCTTCAAAAGCAGTTGAGGTGCCAAGGGGCTATCTTGCAGTATACGTTGGAGAGGAAATGAAGCGATTCGTGATTCCTATATCATACTTGATCCACCCCTCATTCCAAGAGTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGTCTAACAATTCCCTGCAGTGAAGATGTCTTCAAAACATAA 249 0.4378 MGFRLPSIRRASANHGSSKAVEVPRGYLAVYVGEEMKRFVIPISYLIHPSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFKT 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00601 82 Pfam Auxin responsive protein 12 81 IPR003676 GO:0009733
Pste3g00601 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00601 Pste-Chr3 3688301 3688549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00601 22 81 Calmodulin-binding Proteins AT3G43120 58.333 1.12e-20 78.6