Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00598 GTTTCTGTGAAACTGTCATCATTTTATGCAGTGCATGTAACCTACAAACTAGTTGAACTACCAAATTATAAGAATACCTTGCAGTGTCTGTTGGAGATAAAAGGAGGAGAAAAAGAAGAATTTCAATATGATTATCAAACAGTATGTGCACCCATTAGTCCATCCATGGAGGAAGAGTTCCTAAGTGTTACATCTTATTTGAGCAGGCTGGAATTGTTAGACCACCCATTGGATGATCATATCCAAACTCTTCCTCTGCTTGACTCAACAACTCTTGGAATGAGGGGTGGATCAAAATCGATTGGTAACTATATATACAATATTTCTTCAGTTCTCAAGCCACTTAAGTCATTGCATTCCGAAAGTATTATTAGAAGAGCATTGTTTTCTACCTCTCAAGCAGCGTCCAAGGGGATTGAAGTACCAAACGGCTATCTTCAGTGTATGTTGGGGGATATGATGAGGAGGTTTGTGATTCCAATATCATACTTCAACCAAGCAATATTTCAAGAATTACTAAGTCTAGCAGAAGAAATATTCGGATATGATCATCCAACAGTAGGTGGTCTCACAATTCCATGCAAAGAGGATGAGTTCCTGAGTGTCACCTCTTGCTATCCGAATTTAAAATTTCTTTCTTGTAGAATTCCTTTGACATCAGCTATAAACAAAAATGGGTTTCCGTTTAGCAGAGCAACGTTTTCTAACTCTCAAGCAGCATCCAAGGGGATTGAAGTACCAAAAGGATATCTTGCAGTGTATGTTGGGGATAAGATGAGGAGTCAAGCAGGAGAAAAATTTGGATATGATCATCCAACATGTGGTCTCACAATTCCATGCAAAGAGGATGAGTTCCTAAATGTCACGTCTTGCTTATTATTAGGAAGTTCCACAGTGGTGCATACCCCACCTTCTGAATTAAAGGCCAGCAGATTTACGTACTTGAAATTAAAGGCATCAGCAAAGACCATTTTCTTCTCAAGCCTCAGCAAATACAGTACAACAATGGGCTTTCGTTTACCAGGCATCACGAGGGCATCTAATTCAGAGAAGCAAGCATCTTCAAAAGCAGTTGAGGTGCCAAAGGGCTATCTTGCAGTCTATGTTGGGGAAAAAACGAAGAGATTTGTCATCCCCATATCATACTTAATGCATCCTTCATTCCAAAACTTGTTGAGTCAAGCAGAGGAAGAGTATGGATATCATCATCCCATGGGTGGTCTAACAATTCCTTGCAGCGAGGATGTCTTCCAAAACATAACTTCACACTTGAGT 1275 0.3969 VSVKLSSFYAVHVTYKLVELPNYKNTLQCLLEIKGGEKEEFQYDYQTVCAPISPSMEEEFLSVTSYLSRLELLDHPLDDHIQTLPLLDSTTLGMRGGSKSIGNYIYNISSVLKPLKSLHSESIIRRALFSTSQAASKGIEVPNGYLQCMLGDMMRRFVIPISYFNQAIFQELLSLAEEIFGYDHPTVGGLTIPCKEDEFLSVTSCYPNLKFLSCRIPLTSAINKNGFPFSRATFSNSQAASKGIEVPKGYLAVYVGDKMRSQAGEKFGYDHPTCGLTIPCKEDEFLNVTSCLLLGSSTVVHTPPSELKASRFTYLKLKASAKTIFFSSLSKYSTTMGFRLPGITRASNSEKQASSKAVEVPKGYLAVYVGEKTKRFVIPISYLMHPSFQNLLSQAEEEYGYHHPMGGLTIPCSEDVFQNITSHLS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00598 425 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 133 205 IPR003676 GO:0009733
Pste3g00598 425 Pfam Auxin responsive protein 130 204 IPR003676 GO:0009733
Pste3g00598 425 Pfam Auxin responsive protein 348 423 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00598 Pste-Chr3 3678940 3692852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00598 352 418 Calmodulin-binding Proteins AT3G43120 52.239 1.15e-16 75.5