Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00596 ATGGAAGATATTCAACAATACAATATGACCCACGTTGTTGGAAGCACTGATATTACCAATGTAATAGCATCTCCTACATATAGTTTTCGTTGGATAGTGGATGATGCAATAAGAAGCGATACTGCATCAAGTTTTGGAGCATCCACTATACATAGTTTTGCTTCAATAGTGGACAGGGGTATAAGATCCAGTAGAGCAAGTAGTACAGCACGTACTAGAACAGATTTTGGAACCTCTCTTTCCTCTATCTATAGTTTTGCTTCATCAGTGTACACAAGGAGTGTTTCTCCACGATTAATCTCACTAACTGAGCTTGAAGCAACTACCAACAATTTCTCTATTGACTGCAAGATTGGTGCTGGAAGATATGGAGCAGTGTACAAAGCTATACTTGATGATGGTCAAGAGGTTGCAATCAAAAACATTAAAACTAAAACTTGGTTAAGGACAGACATTGAATTGGCCCTTTTGTTCCATTTACATGTACAACACAAGAACTTGGTTAGGTTGGCTGGGTTCTGTGAAGAGAAAGATGAAAGGCACTTGGTGTATGAGTATGTAGGGAATGGATCTTTGTATGATCATTTGCATCATGATAGCAACTTGTTGAATTCATGGAAAATGAGGATCAAAATTGCCTTGGATGTTTCACATGGAATAGAATATCTTCATAATTATGCAATTCCATCTATTATTCATGGAAATATTAAGTCTTCAAACATTCTTCTTGATGCCACTTGGACAGCAAAAGTATCTGATTTTGAATCATCGTTCATTATTGCAGAACCTAAACTTGATTACCGAGACACAATGGTGAGAAGCTTTAGATACGTTGGTCCTGCGTACTATCAACAAAATGTAGTGACAACAAGGACTGATGTGTATGGGTTTGGAGTTGTACTATTAGAACTTTTGACTGGAAAGAGAGTTATATTCAAGTCTAGGGAAGATGGATTCTCAACGTTAAGTCTAGTGGACTTAGCAGTACCTATTATTTTGGCTGGATGTTTGATGAAAATTTTGGATCCTAGGGTAAAGCCACCAAATGTGAATGAAGCTAAGGCATTGAAGTTACTAGCCCACATAGCTATCGAATGTGTAAATTTCAAAGCAACTATAGCTGAAATTGTGATCAATTTGGAGCGAGCTTTAATTAATTGTAGATAG 1167 0.3702 MEDIQQYNMTHVVGSTDITNVIASPTYSFRWIVDDAIRSDTASSFGASTIHSFASIVDRGIRSSRASSTARTRTDFGTSLSSIYSFASSVYTRSVSPRLISLTELEATTNNFSIDCKIGAGRYGAVYKAILDDGQEVAIKNIKTKTWLRTDIELALLFHLHVQHKNLVRLAGFCEEKDERHLVYEYVGNGSLYDHLHHDSNLLNSWKMRIKIALDVSHGIEYLHNYAIPSIIHGNIKSSNILLDATWTAKVSDFESSFIIAEPKLDYRDTMVRSFRYVGPAYYQQNVVTTRTDVYGFGVVLLELLTGKRVIFKSREDGFSTLSLVDLAVPIILAGCLMKILDPRVKPPNVNEAKALKLLAHIAIECVNFKATIAEIVINLERALINCR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00596 388 SUPERFAMILY Protein kinase-like (PK-like) 90 379 IPR011009 -
Pste3g00596 388 Pfam Protein kinase domain 115 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00596 388 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Pste3g00596 388 ProSiteProfiles Protein kinase domain profile. 112 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00596 388 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 98 388 IPR044815 GO:0004674
Pste3g00596 388 Gene3D Transferase(Phosphotransferase) domain 1 187 386 - -
Pste3g00596 388 Gene3D Phosphorylase Kinase; domain 1 79 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00596 Pste-Chr3 3671248 3672414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00596 101 387 Receptor kinase-like Gene Family AT3G55950 50.794 1.12e-81 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pste3g00596 Pkinase 1.9e-38 CL0016