Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00592 GCCTCCTCTTCAATTATATATAGAGATTGTCATGGCTTCAAACACAAACAAGTCAAGCCTTCACAATTTTGAAACAAAGAATATATACTTCCTACACAAGCTTGTTCAAATCATTCTCTTGATCTGCAATGGGTTTCGGTGCAGTGGTGTCCCAAAGGGATATCTTGCCGTCTATGTGGGAGAAAGTGAAAAGAAACGGTTTCTTATTCCTGTATCATATTTGAACCAACCTTCAATCCAAGACTTGCTAAGTGAATCAGAGCAAGAATTTAGATTTGATCATCCAATGGGTGGCCTTACAATCCCGTGTAGAGAAAACTGTAATCTTTCCATTTCTAAGTACAAGAAACAAAGAAAAAAGAGGGGCATGGAAAACCATGCTTTAGATAAAATGACTGATCCAAATGGGGTCCAGCAAGAGGCAAAGAATACTTCCTGCACTAGTTCATTCTCTGCATCTGCAATGGGTTTCCGTTTGCCTCGTCTTCAGAAACAAAGTGGTGTTCCAAAGGGCTATCTGGCAGTCTACGTGGGAGAATATTACAAGAAGCGGTTTGTCATTCCTATATCATATTTGAACCAACCTTCAATCCAAGACTTGCTAAACGAAGCTACTGCTGATTCATTCATTACGCTCCTAAGCAAATACAGGAGAACAATGGGTTTTCGTTTACCCAGTATCAGAAGGGCATCATTTTCTGCAAAACAAGCATCTTCAAAAGTCGTGGAGGTGCCAAAGGGCTATCTTGCAGTATATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCTTATATCATACTTGATCCAGCCTTCATTCCAATATTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATGGGTGGTCTAACAATTCCTTGCAGCGAAGATGTCTTTCAAATATTAACTTCACACTTGAAGCATTTTCTTCTCGAGGCTCGGTAAATATAATACAGCAATGGGTTTTCGTTTACCTGGTATCAGAAGGGCATCATGTGCAGCAAACCAAGCATCTTCAAAAAGCCTTGGACATGCCAAAGGGCTATCTTGCAGTCTACGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCGTACTTGATCTGTCCTTCCTTCCAAGAGTTGTTAAATCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCTTGCAGTGAAGATAACCAACACAAGTCGTTCACATCCAGTAGCATTTACACCATTTTATTCTCAAGTCTCAGCAAATATAATACAATAATGGGTTTTCTTTTACCCAGTATCAGAAGGGCATCATTTTCTGCAAAACAAGCATCTTCAAAAGTTGTGGAGGTGCCAAAGGGCTATCTTGCAGTATATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCATACTTGATTCAGCCTTCATTCCAAGATTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTAACAATTCCTTGCAGCGAAGATGATTTAGGACAAACACAAATCATTCACATCCTGAAGCATTCAAAATTCACAAGGCTGAAGTTTCAAGTCTTTCTTAGACTAGTCTCAATAAATATTTTACAACAATGGGTTTTCATTTACCTGGAATCAGAAGGGCATCAAATGCAGCACATCAAGCCTCTTCAACAGTTGTGGAGGTTCGAAGGGCTATCTTGCAGTAGGAAAATGAAGCGCTTTGTGATCCCCATATCATACTTGATACACCCTTCATTCCAAGTCTTATTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCCAAGGGTGGTTTAACAATTCCCTGCAGTGAAGAATTCTTCCAAAGTAACCAACACAAATCATTCACATCCAAGCATTTGAAACTCATAAGCCTGAACTTTCAAAGCGTCAGCATATACATCACAACAATGGGTTTTCGTTTACTTGGTATCAGAAGGGGATCATTATCTGTGAACCAAGTTTCTTCAAAAGCTGTGGAGGTACCGAAGGGCTATCTTGCAGTCTACGTTGGAGAGAAAATGAAGCGATTTGAAATACCCATATCATACTTGGCCAATCCTTCGTTCCAAGATTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCACGGGTGGTCTAACAATTCCTTGCAGTGAA 2179 0.4043 MASNTNKSSLHNFETKNIYFLHKLVQIILLICNGFRCSGVPKGYLAVYVGESEKKRFLIPVSYLNQPSIQDLLSESEQEFRFDHPMGGLTIPCRENCNLSISKYKKQRKKRGMENHALDKMTDPNGVQQEAKNTSCTSSFSASAMGFRLPRLQKQSGVPKGYLAVYVGEYYKKRFVIPISYLNQPSIQDLLNEATADSFITLLSKYRRTMGFRLPSIRRASFSAKQASSKVVEVPKGYLAVYVGEKMKRFVILISYLIQPSFQYLLSQAEEEFGYDHGWSNNSLQRRCLSNINFTLEAFSSRGSVNIIQQWVFVYLVSEGHHVQQTKHLQKALDMPKGYLAVYVGEKMKRFVIPISYLICPSFQELLNQAEEEFGYDHPMGGLTIPCSEDNQHKSFTSSSIYTILFSSLSKYNTIMGFLLPSIRRASFSAKQASSKVVEVPKGYLAVYVGEKMKRFVIPISYLIQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDDLGQTQIIHILKHSKFTRLKFQVFLRLVSINILQQWVFIYLESEGHQMQHIKPLQQLWRFEGLSCSRKMKRFVIPISYLIHPSFQVLLSQAEEEFGYDHPKGGLTIPCSEEFFQSNQHKSFTSKHLKLISLNFQSVSIYITTMGFRLLGIRRGSLSVNQVSSKAVEVPKGYLAVYVGEKMKRFEIPISYLANPSFQDLLSQAEEEFGYDHPTGGLTIPCSE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00592 716 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 563 610 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 330 389 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 650 716 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 563 610 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 218 277 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 38 96 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 424 496 IPR003676 GO:0009733
Pste3g00592 716 Pfam Auxin responsive protein 153 195 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00592 Pste-Chr3 3639825 3661602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00592 661 714 Calmodulin-binding Proteins AT3G43120 59.259 1.22e-15 73.2