Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00585 CCCAAATCCATATTTTGAAAACCCTAGCGGGTTTGAGAATTGAGAGAGATGGGGAGGAGGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCAGAGAGGAGAGGGAAAGCTACGGTGGAACTCAAGCCAATCTCCACTGTTATTTCTTCATTTCTCGGAATCATGAAACACCGTGGTTATATCAAGGACTTTCAAGTCTATGATCCGCATAGAGTGGGGAGGATAACTGTTGAACTTCAGGGTAGGATTAACGATTGCAAGGCCCTTACATACCGAAAAGATCTCAAGGCAAGGGATATTGAAGCTTACAGATTGCACACTCTTCCAACACATCAGGTTCGTGTTCTAGGAATCAATGCCTGGGGTTATGTTGTGATTACTACTCCAGATGGTGTTTTGGATCATGAAGAGGCAATTAAAAGGAATGTAGGTGGCCAGGTTCTTGGTTACTTTCACTAATTTGGTCTTTACTGTGTTGTTATTTTGGCCAGATATTATCACGTTCAGCTATGTTTCTAGATGAGCATTCAAAGAATGGTGATTTATGCGATGACACAGTTTCTTTTTTTTTTTTTCCTGCATAGATATTTTGAATAATTTATTCTCCATCCCTGTAGCATTAGTAGTCATTTATAATATACACCTAACAACTTGAGGCTCGATTATATTTGCTAGATTTTTCAGCTCTTGG 694 0.3977 MGRRILNDALRSMVNAERRGKATVELKPISTVISSFLGIMKHRGYIKDFQVYDPHRVGRITVELQGRINDCKALTYRKDLKARDIEAYRLHTLPTHQVRVLGINAWGYVVITTPDGVLDHEEAIKRNVGGQVLGYFH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00585 137 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 136 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste3g00585 137 Gene3D - 69 137 - -
Pste3g00585 137 FunFam 40S ribosomal protein S15a 1 68 - -
Pste3g00585 137 SUPERFAMILY Ribosomal protein S8 3 137 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pste3g00585 137 Gene3D - 2 68 - -
Pste3g00585 137 ProSitePatterns Ribosomal protein S8 signature. 107 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste3g00585 137 Pfam Ribosomal protein S8 6 135 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00585 Pste-Chr3 3619560 3620526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00585 1 137 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.372 2.51e-77 223