Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00581 ATGGATTTATTAGGTTCACCATTCCAGTGGCTGAGGGAACTGAGATGGGACTCTCAGTGCTTAAATCCAATAAGCCTTCTTATTGAATGTGCCAAATGTGTTGCATCTGGAAGCATAAAGAATGCAGATATTGGTCTTGAGTACATATCTCAGATTGCATCTCCTAATGGTGATGCAGTGCAAAGGCTGGTCTCTTATTTCAGTGAAGCACTTGGTTACAGGATAATAAAAAATTTGCCAGGTGTATATAAGTCCATCAATCGCTCAAAAGCATCACTGTCTTCAGAAGATATCCTTGTTCAGAGATACTTCTATGATCTGTGTCCCTTTCTGAAGTTCTCAAACCTGATCACAAACCAAGCCATTGTTGAGGCCATGGAATGTGAAAAGGTGGTTCACATTATTGATCTCCATTGTTGTGAACCAGCTCAGTGGATAGATCTTCTACTTACTTTCAAAAACCGTCAAGGAGGTCCACCTCATCTGAAAATTACAGGCATTCATGAAAACAAAGAAGTCTTAGAACAAATAAACTTTCATTTGACAGCTGAAGCTGAGAATTTGGATTTTCCTTTACAGTTCTATCCAGTTGTTAGCAAACTGGAAGATGTTGACTTTGAGAAGTTGCCTGTGAAGATAGGAGATGCTCTTGCAATCACTTCTGTTCTTCAGCTGCATTCTCTTCTTGCAACTGATGATGACATGGCTGGGAGAATCTCACCGGCTGCAGCAGCCTCTATGAATCTGCAGAGAGCAGTGCATATGAGCCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTAGGTGCCTCACCTAAGATGGGGATCTTTCTTAATGCTATAAGAAAACTCCAACCAAAACTGGTGGTGATTACTGAACAAGAATCAAATCTGAATGGATCCAATTTGATGGAGAGAGTTGATAGAGCATTATACTTCTACAGTGCATTGTTTGACTGCCTGGACTCTACTGTTATCAGAACATCAGCAGAGAGGCAAAAGCTTGAGAGCATGCTTCTTGGAGAGCAGATAAAAAATATCATTGCTTGTGAGGGAGTTGATAGAAAAGAGAGGCATGAGAAACTTGATAAATGGATTAGAAGACTGGAATTGTCTGGTTTCATAAAGGTACCTTTAAGTTACAATGGAAGGATAGATGCAATGAATCTTTTGCAGGGATATAGTAATAAGTACAAATTTCGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGTGATAGACCATTGTTTTCTGTATCAGCTTGGAGTTTTAGGAGATGA 1332 0.3986 MDLLGSPFQWLRELRWDSQCLNPISLLIECAKCVASGSIKNADIGLEYISQIASPNGDAVQRLVSYFSEALGYRIIKNLPGVYKSINRSKASLSSEDILVQRYFYDLCPFLKFSNLITNQAIVEAMECEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHENKEVLEQINFHLTAEAENLDFPLQFYPVVSKLEDVDFEKLPVKIGDALAITSVLQLHSLLATDDDMAGRISPAAAASMNLQRAVHMSQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAIRKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLDSTVIRTSAERQKLESMLLGEQIKNIIACEGVDRKERHEKLDKWIRRLELSGFIKVPLSYNGRIDAMNLLQGYSNKYKFREENDCLLVCWSDRPLFSVSAWSFRR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00581 443 Pfam GRAS domain family 24 439 IPR005202 -
Pste3g00581 443 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 436 IPR005202 -
Pste3g00581 443 ProSiteProfiles GRAS family profile. 14 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00581 Pste-Chr3 3602390 3603721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00581 6 443 GRAS Transcription Factor Family AT1G50420 51.121 6.61e-153 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste3g00581 GRAS 7.8e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00581 3 3602390 3603721 Pste3g00581 3 3602390 3603721 ECH