Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00554 GTTCTTTCTTATTTACAAGTGTAATGTTTAGGTTTCAACAAGTTTAGGTATCTATTTACCAACCAAATTGTAAGTTTCACCCATCTACTTGTTCAACCTGACCTAGGACCATTAGGATGTGTTTGGTTTTTCATTTTGTGTCCTTGAAATGAAAATTTTCCAAAGCTCAAAACGGAGTGTCATTAGGTTCCATTTAGTTGGAAACAATTTTTTTTTCCAAACACAGTAGATAATCAAAACCAAGATATCTGCTGTATAATACAGGAAGGACTCTTATGAAAATTTTCTCAGATCACTGAAACTGAAGTTGGTCCATGTGCTATAGTTAAATGGCTAAGAAGGGCTGGTTTAGCATGATTAAGAGGCTGTTTTTATGGGACACACATTCCTCACAAGAGAAGGAGAGAAGAAGAAAGGCTTGGATATTTGGGAGGGTTAAGACAAAGAGGTTGCCTTCAATTACAGCTCCTCCACCACCAAAAGACACAAGACTAAGTGAAGCTGAGGAAGAACACAGCAACCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCAGGTTGCTGTTGAGGTTGTTAGGCTACAATCTGCTCATCAACAACTCAAAGAAAAACAAGAACAGCTTCAACCTGTTAAAACTAGTCATGAAGCTCATCATTCCACACACCAATGCCAGAGGAAGATTCAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTTTCTAGTGAGTTTTTCCACTGTCTCATCACATCCTTTACAGATATCAAGCTTAAGTCCTTGTTCACTTTTTCTTAGCGAAGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATAATTAGAGGAAGAGCTGTGAGACGCCAAGCTTTGAGTACTCTGAAGTGCTTGGAGTCCATAGTAAGTATCCAGTCACAGGTCTTTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTGTCCTGAACATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGGATTTTGTTGAAGGAAGAGGTAGATACCTCTTGCATAAGCAAGAAAGAAGCAGTTCATAAGAGAGAAAGAGTAAAAGAATACTCATTCAACCACAGAAGGTCAGCAGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCTAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTACTCTAAAGCTGGGGAAGAATGTGGAAGGAGACAACTAAAGCTTAGAAATATTCAAAGACAAAATCAAGTTGAAGCATTAGATTCTCCATCACTTGCTTCAAGGAACTCTTTTCCCCACAGGAGCCAGAATTCAGAGGCAGAAGATCACTCATTTCCAAGCTCTCCTTCAATTCCTGCATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGAATAGGAGGGAATTTTGACATGAACTCTGATAGCTATTCGCCATGCAAGAAAAAGTTACCAATTGTTGTGACTTCTAGTAATAGTGAATTGCTTAGTAATGGTAGGATTGCCAAGCTCAGTAGTAGCATTCAGCAAAGATCTCCTAGCTTAAAGGGTCTTCCAAGACCTCTAAAATTAAGTCAGCAATTGAGGGATCTCAGCATTAATTCAGATTGCTCAGTGCCAATTTGAGGTCCACAAATTCCTTTGAATGATTGATTAAAAAGCTGCTTGATTTATCATTGTTCCTAGTAGGCTAGTACCATAAGGGGGCCTTGAAGTAAGAAAATTGTTTGTAATGTATATGCTAGCAAAACTTGATTCTTTTGGGTTGAAAATTTGACTTCAATGTGACAGAAAGTTGTTAATTTCTACACTAATTAGTTCATGA 1983 0.3888 MAKKGWFSMIKRLFLWDTHSSQEKERRRKAWIFGRVKTKRLPSITAPPPPKDTRLSEAEEEHSNHALTVAIASAAAAEAAITAAQVAVEVVRLQSAHQQLKEKQEQLQPVKTSHEAHHSTHQCQRKIQESSAIKIQTAFRGFLVSFSTVSSHPLQISSLSPCSLFLSEARKALRALKGIVKLQAIIRGRAVRRQALSTLKCLESIVSIQSQVFARRLQMVEGRWDCPEHEEMQGSRDKIIRMDSNSERRWDDRILLKEEVDTSCISKKEAVHKRERVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYSKAGEECGRRQLKLRNIQRQNQVEALDSPSLASRNSFPHRSQNSEAEDHSFPSSPSIPAYMAATKSTQAKARSTSSPRARIGGNFDMNSDSYSPCKKKLPIVVTSSNSELLSNGRIAKLSSSIQQRSPSLKGLPRPLKLSQQLRDLSINSDCSVPI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00554 484 Coils Coil 83 103 - -
Pste3g00554 484 ProSiteProfiles IQ motif profile. 177 204 IPR000048 GO:0005515
Pste3g00554 484 MobiDBLite consensus disorder prediction 41 61 - -
Pste3g00554 484 MobiDBLite consensus disorder prediction 339 415 - -
Pste3g00554 484 MobiDBLite consensus disorder prediction 375 415 - -
Pste3g00554 484 MobiDBLite consensus disorder prediction 342 368 - -
Pste3g00554 484 Pfam Protein of unknown function (DUF4005) 371 449 IPR025064 -
Pste3g00554 484 PANTHER IQ-DOMAIN 5-RELATED 1 433 - -
Pste3g00554 484 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00554 Pste-Chr3 3449171 3452235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00554 3 483 IQD Protein Family AT5G13460 41.270 6.41e-92 285