Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00552 AAGGAGAGAAGAAGGACTTGGGTATTTAAGAGGGCTAAGAGCAAGAGGCTGCCTTCAATTACAGCTTCTTTATCACCAAAAGACACAAGACTAAGTGAAGCTGAGGAAGAACACAACAAGCATGCTTTAACAGCTGCCATTGCTTCTGCTGCTGCTGCTGAAGCTGCTATTAGTGCTGCTCAGGTTGCCGTTGAGGTTGTTAGGCTACAATCTTCTCATCAACAATTCAAAGAAAAACAAGAACAGCTTCAACCTGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATAATTCGTGGAAGAGCTGTGAGACGCAAAGCTTTGAGTACTCTGAAGTGCTTGGAGTCCATAGTTAGCATCCAGTCACAGGTCTTTGCAAGGAGACTCCAAAAGGTTGAAGGAAGATGGGATTGTCCTGAACATGAAGAGATACAAGATGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATTTTGTTAAAAGAAGTAGATGCCTCCTGCATAAGAAAGAAAGAAGCAAGGTCTTCTGCATCAGAAAGAAATGAAAGATGGAGGAACTGGATGGGGCATTGGGTGGACACACAACTTTTCAAGAGTAAAGAACTTGAAGATTTAGACTCAATTTTCAACTCACATTACTCTAGAGGTGGGGAAGAAAGTGGAAGGAGACAACTAAAGCTTAGAAATAATCAAGTTGAAGCATTATATTCTCCATTTGCTTCAAGGAGATTTTCTCCTCATAGGAGCCATACTTCAGAGGCAGAAGATCACTCATTTCCAAGATCTCCTTTAATTCCTGCATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTTCACAAGAACAAGGACAATGGGGAATTTTGACATGAACTCTGATGGCTATCCACTATGCATAAAAAAAGTTAACTTTTTTTAGGGATCTCAGCATTAATTCAGATTGCCCCCTGCCAATTTGAGATCAAGAAATTCCTTTGAGTGATTGATATTGATGCTGCTTGCTTTACCATTGTTGCTATTGAATAATTCAAATTTCAAAATAAATGGAGGTTATCAATATTTAAGAAGAGTTTTGTAGGAATTAATCTTTTTCAATTCTTTAGGATAGTTTTTGAATTTAAATATTCTATGAGTTTGATT 1169 0.3875 KERRRTWVFKRAKSKRLPSITASLSPKDTRLSEAEEEHNKHALTAAIASAAAAEAAISAAQVAVEVVRLQSSHQQFKEKQEQLQPARKALRALKGIVKLQAIIRGRAVRRKALSTLKCLESIVSIQSQVFARRLQKVEGRWDCPEHEEIQDDSNSERRWDDSILLKEVDASCIRKKEARSSASERNERWRNWMGHWVDTQLFKSKELEDLDSIFNSHYSRGGEESGRRQLKLRNNQVEALYSPFASRRFSPHRSHTSEAEDHSFPRSPLIPAYMAATKSTQAKARSTSFTRTRTMGNFDMNSDGYPLCIKKVNFF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00552 315 ProSiteProfiles IQ motif profile. 94 121 IPR000048 GO:0005515
Pste3g00552 315 PANTHER IQ-DOMAIN 5-RELATED 11 291 - -
Pste3g00552 315 Pfam Protein of unknown function (DUF4005) 252 294 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00552 Pste-Chr3 3428927 3431699 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00552 1 309 IQD Protein Family AT5G13460 39.058 7.93e-53 177