Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00547 TTGAAGTAGGATCCACAGTCTACTCTTATGAACATTTCATTTCCACAGTCTATCAGTACCAAAATTCTTGTTATTCGCTTTTCTCATCGATTCCGTTTCGCGCAGTTGGCGTCTTCCTTCATTCCCAAGTTTGGTGGGTGCGATGAAGATCGAGGAATTGGACGATGGAGAGTGTAGTAGGGACGAGGAAGGGAAGTTTGAGAGGCAGATTGTGAGCGTTGATGCCAAGAGAGCGTTGGTGGGAGCTGGTGCTCGGATCCTCTTCTATCCCACTCTCTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTGTTACTTGGCGCTGTTCCGTTCCCCAAGGACGTTCCTCACTTAAAGAAACTTGGTGTGGGTGGTGTGATTACTCTTAATGAGCCCTATGAAACCTTGGTGCCATCCTCGTTGTATCGGGCTCACGGTATTGATCATTTGGTGATTCCCACCAGAGATTATCTTTTCGCCCCCTCATTTGTTGATATCACCCGGGCTGTGCAGTTCATTCATCGTGGGTGTTTTCTTTTTAATTTAATTTGGGGAATGTGGGGGAGGGAGAATGCAACTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGAGGAAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAGTACAAGCACATGACACCTGCTGCTGCCCTGGAATATGTTCGGTCTCGAAGGCCTAGAGTGCTACTAGCACCTTCACAGTGGAAGGCTGTTCAAAACTATAACAAGCAAAGACCTTGTCCTTTACCATACTCCCCCTCTGGGGATGCAGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCATAGCACATGTGATGCTGGTATGGAGCTGGCCATTGTTCCTAAAGTGCCTAAGAGTATGCCCATGATTGCAAGATTGTCTTGCCTATTCGCATCCTTAAAAGTATCTGGTAGTAGTGTACCAATGATCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTAAGCCTGCTTGATAAACTATCAAGCAGGTGGCCTGTACAAAAAGATGATGATGAAAATAAGTGAAGTTTGATAATTTCCCCAAGTCGATACAATTGTGTTACATGAAGAGAGGATGCATAGAAAGAGAATAGGAGAGAAGGTTTCTCCAATGTTGTGTTACAGGTTAAGAGGAACATGTTGTAGTTTCTTGTACATATATTTGCCTTTTGCATGTTTGTTAATCCAAGTGAATCCTCGTTCAATTAAAGCATTATTTATGTGAGATCAGGTTGGGACCTAATTGGGACTTGTGTTTATTGATACAAACCCATATCTGCTGATTCACCTGCCTATTTGTACCCTGAACCTGAATACTCCCACCCTGCAGCATTGTCATCAAACACTGAGCCCGTTGGCTTGAGTTTACAATTCTATACAGAGAAAATGAGTTAATTCACTATTAACTCATGGATAATCCAGGTAAACTTGTTAGACTCCGGTAATCTTGCATGAACTTAAGTCCAGAAACAAGTCAATATTGAAATCAAATACAACTTTTTACCTCAATAGTCAATAGTGACTCGTGTCTTATTTGAAGCCAATGTACATTTACTAGATATTTCCAC 1640 0.4256 MKIEELDDGECSRDEEGKFERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSFVDITRAVQFIHRGCFLFNLIWGMWGRENATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKQRPCPLPYSPSGDAVLITKADLEGYHSTCDAGMELAIVPKVPKSMPMIARLSCLFASLKVSGSSVPMIRRLPVSESRAC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00547 297 Gene3D Protein tyrosine phosphatase superfamily 60 220 IPR029021 -
Pste3g00547 297 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 222 IPR020422 GO:0006470|GO:0008138
Pste3g00547 297 CDD PTPMT1 60 219 IPR044596 GO:0004721
Pste3g00547 297 ProSitePatterns Tyrosine specific protein phosphatases active site. 164 174 IPR016130 GO:0016311|GO:0016791
Pste3g00547 297 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 159 211 IPR000387 GO:0016311|GO:0016791
Pste3g00547 297 FunFam Dual specificity phosphatase domain protein 60 222 - -
Pste3g00547 297 SMART dsp_5 63 219 IPR020422 GO:0006470|GO:0008138
Pste3g00547 297 Pfam Dual specificity phosphatase, catalytic domain 157 218 IPR000340 GO:0008138|GO:0016311
Pste3g00547 297 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 275 - -
Pste3g00547 297 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 218 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00547 Pste-Chr3 3377791 3380211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00547 4 285 Protein tyrosine phosphatase (PTP) family AT2G35680 49.541 2.10e-96 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00547 3 3377791 3380211 Pste3g00547 3 3377791 3380211 ECH