Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00546 ATGGAGAACAGCTGGAATCTGATTTTTGAGCTTCTTCTCCTCCTGCTCCACTCAAATGCAGCAAAAGGGGACATCAGTGTGGGCATTGGAATTGGCAATGGGGGTGGTAGTCTTAACAATAACACCAACACACCAGGCCCAGTGCCAAACCTCAACAATGCTTTCCCTGCTCTCCAGGCTTGGAAATCTTCCATCACTGATGACCCTTTCAACATTCTAGATACTTGGGTTGGTCCCAATGTGTGTTCCTACAAAGGTGTCTTTTGTTCAAATTCTGAGGATGATAATGGAATTGTCACAACTGCAGCAACCGAGTCTAATGTTGTTGCTGGAATAGATCTCAACCATGCTAATCTCCAAGGGACTCTTGTCAAGGAGCTCTCTTTGCTCTCTCATATCACTCTCTTCCATCTCAACAGTAACAGGTTTTCTGGCTCAGTTCCTGACACATTCAGAGACCTCACCTCCCTCCAAGAGTTGGACCTCAGCAACAACCAACTCTCAGGCCCTTTCCCCATGGCCACTCTATTCATGCCTTCCCTCGTTTACTTGGACCTCAGATTCAACAACTTCTCAGGCCAGCTTCCTCACCAACTCTTCAACAAGAAACTTGATGCAATATTCCTCAACAACAACAATTTTGGAGGTGAAATTCCAGATAATTTGGGAAATTCACCCGCCTCTGTCATCAACTTGGCCAACAACAAGTTGAGTGGAACCATCCCTTTTAGCTTTGGCTTCATGAATCCTAGACTTAAGGAAATTCTCTTCCTTAATAACCAGTTAACTGGTTGTATTCCCCAAGGAGTAGGGATCTTCACCGAGATGCAAGTTTTTGATGTCAGCTTCAACTCACTAATGGGCCATTTGCCAGACACAATGAGTTGCTTGCAGGAAATAGAGGTTCTCAATTTCGCACATAACAAGCTCTCTGGGGAATTATCAGATGTGGTGTGCTCCTTGAGAACTCTATTAAATCTAACCGTTGCTTACAATTTCTTCTCTGGGTTAAGCCAGGAATGTTCAAACCTATTCAATGTGGGCTTTGATTTCTCGGATAACTGTATACCTGGAAGGGACATGCAAAGACCAGGTCCAGAGTGCTCTATGATCCCTGGTGGTAGTCTCAATTGTCTCAGAATTCCTACTCCCAAGCCTCTTGTTTGCCCTGTAACTTTGTCAACCTCTTCTCCCTGA 1197 0.447 MENSWNLIFELLLLLLHSNAAKGDISVGIGIGNGGGSLNNNTNTPGPVPNLNNAFPALQAWKSSITDDPFNILDTWVGPNVCSYKGVFCSNSEDDNGIVTTAATESNVVAGIDLNHANLQGTLVKELSLLSHITLFHLNSNRFSGSVPDTFRDLTSLQELDLSNNQLSGPFPMATLFMPSLVYLDLRFNNFSGQLPHQLFNKKLDAIFLNNNNFGGEIPDNLGNSPASVINLANNKLSGTIPFSFGFMNPRLKEILFLNNQLTGCIPQGVGIFTEMQVFDVSFNSLMGHLPDTMSCLQEIEVLNFAHNKLSGELSDVVCSLRTLLNLTVAYNFFSGLSQECSNLFNVGFDFSDNCIPGRDMQRPGPECSMIPGGSLNCLRIPTPKPLVCPVTLSTSSP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00546 398 Gene3D Ribonuclease Inhibitor 227 365 IPR032675 -
Pste3g00546 398 PRINTS Leucine-rich repeat signature 157 170 - -
Pste3g00546 398 PRINTS Leucine-rich repeat signature 297 310 - -
Pste3g00546 398 ProSiteProfiles Leucine-rich repeat profile. 156 177 IPR001611 GO:0005515
Pste3g00546 398 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 46 383 - -
Pste3g00546 398 Pfam Leucine rich repeat N-terminal domain 54 90 IPR013210 -
Pste3g00546 398 Gene3D Ribonuclease Inhibitor 53 226 IPR032675 -
Pste3g00546 398 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Pste3g00546 398 FunFam Leucine-rich repeat extensin-like protein 1 55 224 - -
Pste3g00546 398 SUPERFAMILY L domain-like 57 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00546 Pste-Chr3 3356118 3357314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00546 49 380 Leucine-rich Repeat extension Gene Families AT3G24480 49.408 9.79e-103 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00546 3 3356118 3357314 Pste3g00546 3 3356118 3357314 ECH