Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00544 ATGACAACCCCTCTTTCCCAAAACACTCCTTACTCTAAGATGGACTCTATAACCTTGAACCTCTGCACCAATTCCTCCCTTCAATGCAATCCACTTCCACCACCAGCCACAACTTCCAATCTATCTATCCATAATCCCCTTACAACGCCACCCTCCAAGAAGCCACGTGGTAGGCCACCAGGCTCTAAGAATAAGCCTAAGCTTACACACACCTCCCTCCCAATGGTAGCTCAGCCTACTGAGAACTCACTAGTAATTGTGAATGTGGCTCCAGGTCAAGACATCATGGAGTCCATAACTGATATATGTCGCCAAAGAAGTGTACATGCCACCATACTCGATGCCTCAGGTATAATTTCCAATGTCACCCTTCGTAACTCAAAATATGCAACCACCACCCTTACGCTCAATGGGCCCTTAACGTTGTTATCTATGAATGGAACGTACTTATACAATCACCCATACCCATGCTTATCATTCTCAATCAGCCTTTTCAACTCTCTAGGCAATCTTTTCGGTGGTACCATATGTGGTAGAGTAATTGCGAGTGAGAATGTTCACATCGTCCTTTCAACCTATAAGAGTTTTGAGTTTTACAAGTATGCTCCTAAAGCTTTAGAAGGAGATCACAAAAATGACGAGAATAATAACAATTCTCGCAATCACCATAGTGATTTTAAATGA 684 0.4284 MTTPLSQNTPYSKMDSITLNLCTNSSLQCNPLPPPATTSNLSIHNPLTTPPSKKPRGRPPGSKNKPKLTHTSLPMVAQPTENSLVIVNVAPGQDIMESITDICRQRSVHATILDASGIISNVTLRNSKYATTTLTLNGPLTLLSMNGTYLYNHPYPCLSFSISLFNSLGNLFGGTICGRVIASENVHIVLSTYKSFEFYKYAPKALEGDHKNDENNNNSRNHHSDFK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00544 227 Gene3D - 83 223 - -
Pste3g00544 227 CDD DUF296 86 183 IPR005175 -
Pste3g00544 227 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 218 IPR014476 GO:0003680
Pste3g00544 227 MobiDBLite consensus disorder prediction 32 49 - -
Pste3g00544 227 ProSiteProfiles PPC domain profile profile. 79 215 IPR005175 -
Pste3g00544 227 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 192 IPR005175 -
Pste3g00544 227 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 198 - -
Pste3g00544 227 MobiDBLite consensus disorder prediction 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00544 Pste-Chr3 3335001 3335684 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00544 53 221 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.868 1.17e-23 94.0