Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00540 ATGGCGGAAAATTCCATGACGATTTCATTCCCCCAAAAATCCCATTCCTCTGACTCAGACTCTAGAACAGCAAACCTTCCCACCAATTCCTCCCTCCAAAGAGATCTAAATCCACCATCAGGCACCGTAGCTAAAAGGCCACGTGGTAGGCCTTTAGGCTCGAAGAATAAACCTAAGCTTAGGTCCCTTTCCCTCCAAGTGGCCTCATCCATGGGGCCCTCGCACATCATGGTGAACGTGGCTCCGGGTAGGGACATTATGGAATCCATCCTTGATGTGGCTCGTCAAAGACATGTTAACCTAACCATTCTCAGTGCCTCGGGAATCATTGCTAGCGTGACCCTTCGCAACTCACACGATGGAGCCACCACCATTACGCTCAATGGACCCTTCACCTTGCTCTCTATGAACGGCTCACTCTCATTCAACCACCAATACTCTCCGTCCTCCTTTTCAATCGAACTTTCCACCTCTCAAGGCCAACTTTTTGGCGGCCCCATTGGTGGTAACATCATTGCTAGTGATAACGTTCGCGTCCTCCTTTGCAGTTACAAGAACTTCGAGATTTACAAGTTTACTCCACAAGTTGAAGAAGACAATAATAATAATAACAACAATTATAAGAATCATCATAGTGATTTTAATGGGGGTAGCAACTTGTCCGGATTCAACATGGTTAGTGTTGGACAGGATGGTAAATGA 702 0.4644 MAENSMTISFPQKSHSSDSDSRTANLPTNSSLQRDLNPPSGTVAKRPRGRPLGSKNKPKLRSLSLQVASSMGPSHIMVNVAPGRDIMESILDVARQRHVNLTILSASGIIASVTLRNSHDGATTITLNGPFTLLSMNGSLSFNHQYSPSSFSIELSTSQGQLFGGPIGGNIIASDNVRVLLCSYKNFEIYKFTPQVEEDNNNNNNNYKNHHSDFNGGSNLSGFNMVSVGQDGK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00540 233 MobiDBLite consensus disorder prediction 1 38 - -
Pste3g00540 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 215 IPR014476 GO:0003680
Pste3g00540 233 MobiDBLite consensus disorder prediction 1 61 - -
Pste3g00540 233 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 190 - -
Pste3g00540 233 CDD DUF296 76 174 IPR005175 -
Pste3g00540 233 Gene3D - 74 213 - -
Pste3g00540 233 ProSiteProfiles PPC domain profile profile. 68 206 IPR005175 -
Pste3g00540 233 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 185 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00540 Pste-Chr3 3311092 3311793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00540 24 221 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 30.583 4.95e-24 94.0