Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00536 ATGGCTAAAAATTCCATGACAATATCCTTCTCTCAAAACTCCCCTTCTTCTGAATCAGACTCTGTGACCTCAAACATTCGTACCAATTCCTTCATCCAAAGAAATCAACTTCAACAACCAATCACCACTACCAACCAACCTGGCCAAAATATACCCATTGTGACCCCAATAGCCAAAAAGCCACGTGGAAGGCCACCAGGCTCTAAAAATAAGCCAAAACTTAGGGCTACTTCATTCTCAGCGGCACTTCAGTCCTTAGGGCCCTTGCATGTCATTGTAAATGTGGCTCCAGGTAGGGACATCATGGAATCTATCCTTGGTGTTGCTTTCCAAAGATGTGTTAACCTCACGGTTCTAAGTGCCTCAGGCACAATTGCTAGTGTGACTCTTCGTCACTCGCACAGTGAAGTCACTACACACATGCTTAATGGACCCTTCACCATGCTCTCTATGAACGGCACATACTCAACCATCCACCAATACCCTCCCCTATCCTTCTCAATCAGTCTTTCCACGTCTCAAGGCCAGCTTTTTGGTGGTCCTATTGCTGGCAGAGTTATTGCTGGTGATAACGTTCGCATTGTCCTTTGCACTTACAAGAACCTCGAGTTCTACAAGTTTGCTCCTGAATCCAAAGAAGGTGGCAACAACAATAGTGATAATAAGAATCACCCTAGTGATTTTAATGGGGGTGGGAACTTGTCAGGATTCGATATGCTTAGTGGTGAAAATTTTGATTGGTGA 744 0.4449 MAKNSMTISFSQNSPSSESDSVTSNIRTNSFIQRNQLQQPITTTNQPGQNIPIVTPIAKKPRGRPPGSKNKPKLRATSFSAALQSLGPLHVIVNVAPGRDIMESILGVAFQRCVNLTVLSASGTIASVTLRHSHSEVTTHMLNGPFTMLSMNGTYSTIHQYPPLSFSISLSTSQGQLFGGPIAGRVIAGDNVRIVLCTYKNLEFYKFAPESKEGGNNNSDNKNHPSDFNGGGNLSGFDMLSGENFDW 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00536 247 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 227 IPR014476 GO:0003680
Pste3g00536 247 MobiDBLite consensus disorder prediction 211 235 - -
Pste3g00536 247 CDD DUF296 92 199 IPR005175 -
Pste3g00536 247 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Pste3g00536 247 MobiDBLite consensus disorder prediction 212 230 - -
Pste3g00536 247 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 206 - -
Pste3g00536 247 Gene3D - 90 218 - -
Pste3g00536 247 MobiDBLite consensus disorder prediction 38 73 - -
Pste3g00536 247 MobiDBLite consensus disorder prediction 38 52 - -
Pste3g00536 247 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 199 IPR005175 -
Pste3g00536 247 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00536 Pste-Chr3 3291851 3292594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00536 57 236 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.414 2.22e-22 91.3