Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00531 ATGGATCGAGAATGGGGATCGAAGCCGGGGAGCGGCGGTGCGGCGACGGCGCAGAACGAGGCGATCGACCGGCGGGAGCGGCTGCGGCGGCTGGCGCTGGAGACCATAGACCTAGCAAAGGACCCGTATTTCATGCGGAACCACTTGGGGAGCTACGAGTGCAAGCTGTGTCTGACTCTGCACAACAACGAGGGCAATTACCTGGCCCACACTCAGGGCAAGCGCCACCAGACCAACTTGGCCAAGCGCGCCGCTCGCGAGGCCAAGGACTCCCGCCCAGCCCCAGCCCCACAAGCGCAAGGTCACCCTTCGCAAAACCGTCAAGATTGGACGCCCTGGCTACCGCGTCACCAAGCAATTGAATATCCCGAGATTGAAGACCTCACCAAGCCTAGACACCGCTTTATGTCTTCCTACGAACAGAGGGTGCAGCCATTTGATAAAAGGTATCAGTACCTTTTGTTTGCGGCCGAACCATATGAAATTATTGCTTTCAAGGTTCCTAGCACAGAGATTGATAAGTCCACTCCAAAGTTCTTCTCACACTGGGATCCAGACTCCAAGATGTTCACGCTGCAATTGTATTTTAAATCCAAGCCACCAGAGGCAAACAAACCGCAGCCTGCTTCTACTGTCAATGGTACAGCACCTTCTGGTGTTCCGCCAAGGCCTTTGCCCCCACCACCTCAAGCTCCACTACCACCGCCTCCACCTCCTCCACAAGGGCTACCTCCTGGTGCACCTATGACGAATCCTCCTAGAGCTCCTCCGCCGCCAATGCCAGGATCTATGCCACCTCCTCCTCCTCCTATGGCAGCAGCTAACAATCCTAGACCTGCACCTTCTGGTGGAATGCCATCTGTCCCACCTCCACCCCCTGTTGCAAGTGGAACATCGGGTTTCAGCATGGGTACTAGACCACCTTCAATGCCACCTCCACAAGGTTTTCCTGCCCAACCAATGCAGGGTCAGGGAGGTCGTCTTCCTCCACCTCCCCCTAACATGGGGCAGTAGCTCCCTCAGGTTTTAGAGTGGAACAGCAAGTGGGAAATGTTGAACAACTGTAATAGAATGTTCCCTGTCTGTTAAGGACTTACTGTTTTGTAGCTAAAAGGCTAGGTTTCATAAGCAATACACAAAATATCAAATTACCTGTAAACTCTTCATTTTGTCATTTTTATGTTTAAAACTTTAGATGTTGAAGTATCCAGATTTTTGGTATTTAGTATTGATGCCTTTTGAGTATTGACCGTGTCCACAAATTTAGGCCTCAACTGCATGATATGGTTGTTGATTTGTTGAGAGTAATTTATGATGAAGGTTTGTTTTGTATTTTTTTATGTAGTAGTAACTGTTTGATAATGG 1365 0.504 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDSRPAPAPQAQGHPSQNRQDWTPWLPRHQAIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASTVNGTAPSGVPPRPLPPPPQAPLPPPPPPPQGLPPGAPMTNPPRAPPPPMPGSMPPPPPPMAAANNPRPAPSGGMPSVPPPPPVASGTSGFSMGTRPPSMPPPQGFPAQPMQGQGGRLPPPPPNMGQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00531 337 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g00531 337 Pfam Zinc-finger of C2H2 type 52 76 - -
Pste3g00531 337 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Pste3g00531 337 MobiDBLite consensus disorder prediction 71 110 - -
Pste3g00531 337 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 120 190 IPR031781 -
Pste3g00531 337 PRINTS Proline rich extensin signature 201 222 - -
Pste3g00531 337 PRINTS Proline rich extensin signature 222 238 - -
Pste3g00531 337 PRINTS Proline rich extensin signature 240 257 - -
Pste3g00531 337 PRINTS Proline rich extensin signature 261 286 - -
Pste3g00531 337 MobiDBLite consensus disorder prediction 199 337 - -
Pste3g00531 337 Gene3D Classic Zinc Finger 46 89 - -
Pste3g00531 337 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Pste3g00531 337 MobiDBLite consensus disorder prediction 219 296 - -
Pste3g00531 337 SMART CactinC_cactus_3 106 203 - -
Pste3g00531 337 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 100 - -
Pste3g00531 337 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Pste3g00531 337 Gene3D - 114 204 - -
Pste3g00531 337 MobiDBLite consensus disorder prediction 306 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00531 1 239 C2H2 Transcription Factor Family AT2G32600 71.146 1.95e-105 308