Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00530 ATGGCAAGCAATTACATGATCTCCTTCTCCCAAAGCTCCCTTTCCTTTGATTCAGACTCTATGACCTCAAACCTTTGCTCTAATACCTCCGTTGAATGTAATGCATTTCCACTACCCACCTCCATTGCTAAACAACCATGTGAAAATCTCCCTCTTGTCACCCCACCCTCAAAGAGGCCACGAGGTAGGCCTTTCGGCTCTAAGAATAGGTCGAAGATTAGGTCCTCCTCCCTTCCAATGGCATCTCATCATACCAAACACTCATTTATTGTCGTGAATGTACCTTCAGGAAGGGACATCATGGAATCCATCCTCGATGTCGCTAGGGAAAGATGTGTTAATCTCACCATTCTTAGTGCCTCAGGCACTGTCACAAATGTGACCCTCCACAACTTGCACTTTGGAGCCACCACCCTTGCACTTGACATACCATTCACCATTCTCTCTATGAATGGAACATACTTATACAACCACCAATATCCTTCCTCATCATTCTCAATCAACCTTTCCACCTTTCAAGGTCATCTTATTGGTGGCCCCATTGGTGGTAAAGTCATTGCTGGTGATAATGTTTGCATTGTTGTTTTAACCTACATGAATTTTGAGTTTCAGAAGTATCCTAAAGTTGAAGAAGTTGACAATAATAACAACAACTATAATTTCAACAACTCTTTGTGGTCAATTATGTGA 690 0.4217 MASNYMISFSQSSLSFDSDSMTSNLCSNTSVECNAFPLPTSIAKQPCENLPLVTPPSKRPRGRPFGSKNRSKIRSSSLPMASHHTKHSFIVVNVPSGRDIMESILDVARERCVNLTILSASGTVTNVTLHNLHFGATTLALDIPFTILSMNGTYLYNHQYPSSSFSINLSTFQGHLIGGPIGGKVIAGDNVCIVVLTYMNFEFQKYPKVEEVDNNNNNYNFNNSLWSIM 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00530 229 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 197 IPR005175 -
Pste3g00530 229 MobiDBLite consensus disorder prediction 49 81 - -
Pste3g00530 229 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 208 - -
Pste3g00530 229 Gene3D - 88 218 - -
Pste3g00530 229 CDD DUF296 90 197 IPR005175 -
Pste3g00530 229 ProSiteProfiles PPC domain profile profile. 84 219 IPR005175 -
Pste3g00530 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 217 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00530 Pste-Chr3 3247532 3248221 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00530 58 211 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.335 1.02e-20 86.3