Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00507 AACAGAATAGGTAGCTGTTGGGTGAGGAAAAAGAACACCATTAATTGAACTAAAAGCTATGTTTTTATTGGCTCAGATTCAACTGGGTTACATGCAGAAGCATCATTATTATCATTCTGTTTCTTTTTACGAGTCTCACACCCAGTTTGCTTTTGGGAGTTGAAAGCTGAAGAGAGCTGAGAAAATAGAATGAACGACACTGCTTCATTCATTGGCTAGGAGTTAAACTAGAGAGGAAAGGAGGGTAAAACAGTTGCAGAGCACAGAGGAAGTTTTGATCTGTGGTACAAGTTAGGGAATGCCTTCACGAGACACGAGTGTGTCAGATGTTTTGGGACACTGAGGTATCTTTCTTTTTGAGGATACGTCGCTCCACAAAGTAACAGGCGACAGATGAAGATAGAGATTTCACTATGGGGCTGTTCTCTTCTTTGAACTTTCCCATCTTTTTCTTCTCACTTCCCTCATTGTAGCACTGCAGAATTTTGGCCTTGTCACTTCCCTTCCCTTTTCCTTTTCCCACTTTTGAATTGCCTTTACCTTTCCAGAATTTTATTCTACCAAGGTGGGTTATCTTACTTGCTCCTTATTTTACTGTGCACTCCAATTGTTTAACAGTAGCAACATGGCTTGTTAGTTTTCGCTTAGTATGTAATGTAACTTTATTTATTTTATATTCCATTATTTTAATGTTGTGTGATTTTGCTTACCATGCCTCCTGCATGTTCCGGACGCATGTTTTTGTCATGTAATGCAGATTTTCACGAGGCGTTTTTCTTGTGTCTTGAAAAATTGTGTCTGTGACTGGGTTTTCTTAGTAGGTTTGGCTTCACCGTTACCACTTGCACTATTCAAAGAGCGCGGTAGCATTTCCCTCATGGGGAGAGCCATAAGGTGGTTGAAGGGGTTGTTTGGGATAAAGACAGACAGAGATCGCAAAGAGAATTTGAATTCTGGCACCAAATGGTGTCACTCAGACAGAGGTTCAAGAGGTTTATGTCATAATCCAACCACCATTCCACCCAATATTTCACCTGCAGAGGCCGCTTGGCTGCAATCCTTCTACTCAGAAACCGAGAAAGAGCAGAACAAGCATGCCATTGCAGTTGCCGCAGCCACCGCAGCAGCTGCAGACGCTGCTGTGGCTGCAGCTCAGGCTGCCGTGGCTGTGGTTAGGCTAACCAGCCATGGCAACTGCAGAGACACCATGTTTGGTGGTGGACAAGAAAGGTCTGCTGTTGTCAAGATTCAAACTGTGTTTAGAGGATACTTGGCAAGGAAGGCATTACGGGCTCTAAAAGGATTGGTTAAGTTACAAGCACTTGTGAGAGGGTACTTAGTGCGGAAGCAAGCAGCAGCAACCCTGCATAGTATGCAGGCTCTAATTAGAGCTCAAGCAACAGTAAGGTCTAAGAAATCTGGCGGACTCACCAACGCAAAGAATGAAATACATAGGTTTCAACCACAGGCGCGAAGATCCATGGAGAGATTTGACGACATTAAGAGCGAGTACATAGCTCCCATCCACAGCAGAAGGCTATCATCTTCTTTTGATGCCACAATGAATAATGCAAACAGTGTCGATGGGAGCCCCAAAATAGTGGAAGTGGACACGGGCAGGCCAAAGTCAAGGTCTCGCAGGAGCAACACCTCCATGTCAGATTTTGGCGATGACCCATCATTTCAGGCACTTCCTTCTCCTCTCCCATTCCCTCATTTGTCTATACCAAACCACAAGAATCTCCATGACTCAGAATGGGGTTTAACAGGAGAAGAGTGCAGATTCTCTACAGCACAAAGCACTCCACGCTTCACTAACTCTTGTAGTTGTGGATCTGTGGTTGTTGCACCTATGACACCTAGAACTGTTTGCGCCGATAACTTCTTCTATGGACAGTACCACAATTTCCCAAACTACATGGCAAGCACTCAGTCTTTCAAGGCTAAATTGAGGTCTCATAGTGCTCCAAAACAACGCCCGGATCCCGGGCCAAAGAAAAGGCTTTCCCTCACTGAGATGATGGAGTCTAGGAGTAGTTTAAGTGGGGCTACAATGCAAAGATCTTGCTCACAGATTCAGGAAGCCATTAATTTTAAGAATGCTGTGATGAGTAAGCTTCACAAGTCCACAGAACTTGGTAGGGAGACAGACATTAACTTTTCCAACCAGAGGAGGTGGTGATTGGTGAAACTTGTGTTAAGACAGATCTCGCTTTATTTTGCTTTTTCACATTGTTAGCAATAGTTCTGTGTATGTGTTTCTGCGCCAGTGCGCCCCATGATTGGCAATTTGAGAACATATAGTGGCTTTGAAACAAGGGAGTCAAGACAAAATAGAAGGAAAACAATGAGAAGGTCCCATTGTAATTTTATCATGGAATTATCTTCATATATTGTCATTATAATCAAATGCTACAGCAATTAATTGTTATCTTCGTTCA 2441 0.4334 MQIFTRRFSCVLKNCVCDWVFLVGLASPLPLALFKERGSISLMGRAIRWLKGLFGIKTDRDRKENLNSGTKWCHSDRGSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNCRDTMFGGGQERSAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSGGLTNAKNEIHRFQPQARRSMERFDDIKSEYIAPIHSRRLSSSFDATMNNANSVDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQALPSPLPFPHLSIPNHKNLHDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVVVAPMTPRTVCADNFFYGQYHNFPNYMASTQSFKAKLRSHSAPKQRPDPGPKKRLSLTEMMESRSSLSGATMQRSCSQIQEAINFKNAVMSKLHKSTELGRETDINFSNQRRW 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00507 476 ProSiteProfiles IQ motif profile. 159 187 IPR000048 GO:0005515
Pste3g00507 476 ProSiteProfiles IQ motif profile. 183 210 IPR000048 GO:0005515
Pste3g00507 476 Pfam Protein of unknown function (DUF4005) 366 437 IPR025064 -
Pste3g00507 476 MobiDBLite consensus disorder prediction 222 242 - -
Pste3g00507 476 Gene3D - 158 201 - -
Pste3g00507 476 SMART iq_5 181 202 IPR000048 GO:0005515
Pste3g00507 476 SMART iq_5 158 180 IPR000048 GO:0005515
Pste3g00507 476 Pfam IQ calmodulin-binding motif 160 180 IPR000048 GO:0005515
Pste3g00507 476 Pfam IQ calmodulin-binding motif 186 200 IPR000048 GO:0005515
Pste3g00507 476 MobiDBLite consensus disorder prediction 272 311 - -
Pste3g00507 476 PANTHER IQ-DOMAIN 5-RELATED 43 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00507 Pste-Chr3 3000676 3003365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00507 43 435 IQD Protein Family AT3G16490 53.266 5.70e-99 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00507 3 3000676 3003365 Pste3g00507 3 3000676 3003365 ECH