Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00489 ATGGCAACCAGAAACAATTCTAGGTTCTCCTCAGAAAACAGTATTGCCTCCTCCTCCCATCACCAGCCACCTAACCCTATCAAGGCCGCGAAGCCACGTGGCAGACCCCCGGGCTCCAAAAACAAACCGAAGCCCATCCAAGTTAAGCCCAAATTAGCTGAGCCCTCCACCAAGATCATTAAGGTCAATGTTACTCCAGGTAAGGATGTCATTGAGACCATCATTAACGTTGCTCATCAGAGCCACGTCAGCCTTACCATCCTCAACGCCTCAGGTAAAATCGACAATGCAACCCTTCGCACCTCACCCCATACTGGAGCCCTAAAGCTCTATGGGCCATTTACCTTGGTTTCCCTCACGGGCTCATACATATACAAAAACCACTACACCCTTCACCATGGTGCTACCCCTCCACCTCCCCAATCCTTTGGGATCAACCTCTGCACCTCTCAAGGCCAAGTGTTTGGTGGCCCCGTTGCCGGCACAGTTATCGCCGGTGACAATGTTAACCTAATGATCTCAACCTTTACTAACCCTGACATTTACGAACATATCCCTGCAGGCAAGCATGAGGACAACAAAGACAACAATCAACCCTAG 600 0.5017 MATRNNSRFSSENSIASSSHHQPPNPIKAAKPRGRPPGSKNKPKPIQVKPKLAEPSTKIIKVNVTPGKDVIETIINVAHQSHVSLTILNASGKIDNATLRTSPHTGALKLYGPFTLVSLTGSYIYKNHYTLHHGATPPPPQSFGINLCTSQGQVFGGPVAGTVIAGDNVNLMISTFTNPDIYEHIPAGKHEDNKDNNQP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00489 199 MobiDBLite consensus disorder prediction 1 53 - -
Pste3g00489 199 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 178 IPR005175 -
Pste3g00489 199 FunFam AT-hook motif nuclear-localized protein 17 56 192 - -
Pste3g00489 199 ProSiteProfiles PPC domain profile profile. 53 197 IPR005175 -
Pste3g00489 199 Gene3D - 57 189 - -
Pste3g00489 199 CDD DUF296 62 176 IPR005175 -
Pste3g00489 199 SUPERFAMILY AF0104/ALDC/Ptd012-like 58 181 - -
Pste3g00489 199 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 197 IPR014476 GO:0003680
Pste3g00489 199 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00489 Pste-Chr3 2781992 2782591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00489 31 191 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.759 2.38e-22 89.7