Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00479 GAGGGGGAGATGGCAGAGGGAAAATTATCAAGGTGGGAGAAAGAGGAAGAAGAGAAAGAAGAAGAAGAAGCAAAAGTAGATATATGGAAGTACATATTTGGGTTTGTGGAAATGGCAGTGATAAAATGTGCGATCGAGCTTGGCATAGCTGAAGCCATAGAGAAACATGGAAGTCCAATGACAGTGTGGGAGCTATCATCAAGTCTGGGGTGTGATCCTTCACTTCTTAACCGCATCATGAGGTTCCTAGTGAACCGAAAGATATTCAAAGCCCTAAGGGATGGTAATGGGGAGGGATGCACGGTGTATTGTCAATCCCCTTTGTCTCGACGTTTGATAAGAAACGGGCCAGACAGCATGGCCAGTTTGCTTTTGCTGGAGAGTAGTCCAGTAATGTTGGCACCTTGGCACAAGCTAAGTGCTCATGTGTTGGCGAACGATAATCCCTCATTTGAAAAGGCTCACGGTGAAGAGTTGTGGCGTTATGCTGCCTCCAATCTTGCTCACAACAACCTCATCAATGAAGCAATGGCTTGTGATACTAGGCTTTTTATGCCCATTCTCATCCAAAGTTGCAACGAGGCATTTGATGGCCTCAATTCTATCGTGGATGTGGGTGGGGGCAACGGCACTGCCATGCGTATTCTCGCTAAGGCTTTCCCTTCCATTCGGGTCATCAATTTTGATCTTCCTCATGTCATTGATGAGGCCTCTCCATGTGATCTTGTCCAACATGTCCCAGGCGACATGTTTCTTAGTGTTCCAAAAGCTGATGCTGTTTTTCTTAAGTGGGTTTTGCATGATTGGTCAGACGAAAAGTGCATCCAAATCTTAAAGAATTGTAGGGAAGCAATTTCAAAGGAAAATGGAAGGGTTATTATTGTGGAAGCAGTGATTGAAGAAGAAGATGGGAACCATAACAGGTTGAAGGATATAGGATTGATGCTAGACATGGTAATGATGGCACACACCAACTTGGGCAAAGAGCGAACCCTCAAAGAGTGGGAATATGTCATTAAAATGGCAGGATTTACCACATTCACAGTCAAACCCATTCATGCTGTGCAGTCTGTCATAATGGCTTTCTACTAGAATAACCACAATCAGACATAAAATTATCTATCTTTATTTCGTATTTCCATGTTACCCTCCCAATTGTTCTAAAGTATCTGCCCTTGTATTTCCATCCTGTTAGGAAAATGTTAGGGTTAGACAATGAAAACTCATTTTATCTTCTTCCTTTATGCGTTTTTTCGTTGTGTGATATATATTTTTAAATTTTAGTAGCATCGGTTGTAACATTATAATTTTTATAACGTACTATATGTATATTTTGTAAATTTTTT 1346 0.4131 MAEGKLSRWEKEEEEKEEEEAKVDIWKYIFGFVEMAVIKCAIELGIAEAIEKHGSPMTVWELSSSLGCDPSLLNRIMRFLVNRKIFKALRDGNGEGCTVYCQSPLSRRLIRNGPDSMASLLLLESSPVMLAPWHKLSAHVLANDNPSFEKAHGEELWRYAASNLAHNNLINEAMACDTRLFMPILIQSCNEAFDGLNSIVDVGGGNGTAMRILAKAFPSIRVINFDLPHVIDEASPCDLVQHVPGDMFLSVPKADAVFLKWVLHDWSDEKCIQILKNCREAISKENGRVIIVEAVIEEEDGNHNRLKDIGLMLDMVMMAHTNLGKERTLKEWEYVIKMAGFTTFTVKPIHAVQSVIMAFY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00479 360 Pfam Dimerisation domain 37 81 IPR012967 GO:0046983
Pste3g00479 360 CDD AdoMet_MTases 199 292 - -
Pste3g00479 360 Gene3D - 11 109 IPR036388 -
Pste3g00479 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 360 IPR016461 GO:0008168
Pste3g00479 360 PIRSF O-mtase 4 360 IPR016461 GO:0008168
Pste3g00479 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Pste3g00479 360 Pfam O-methyltransferase domain 133 341 IPR001077 GO:0008171
Pste3g00479 360 Gene3D Vaccinia Virus protein VP39 111 359 IPR029063 -
Pste3g00479 360 FunFam O-methyltransferase family protein 111 359 - -
Pste3g00479 360 FunFam O-methyltransferase family protein 9 109 - -
Pste3g00479 360 PANTHER O-METHYLTRANSFERASE 36 344 IPR016461 GO:0008168
Pste3g00479 360 SUPERFAMILY "Winged helix" DNA-binding domain 15 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00479 Pste-Chr3 2746790 2748201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00479 38 346 Monolignol Biosynthesis Gene Families AT5G54160 36.709 2.94e-67 214