Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00478 ATGTTGCGTATAAGCTCAAAGGATAAAGCTCGTAATAATATTGAAGGCGCTGAGGACAGGAAAATGGAGAGCACACTGAAGCACTTGAGAGATGGAGAGTCAGTGTTGGACCTCAGCCCAACTTCCGCAGTCAGCGGCGGCGTCGTTGATGTCTACGGTGAGGATCGCGCCACCGAGGACCAACTTGTAACCCCATGGACTTTCTCGGTTGCCAGTGGCTACTCTTTGCTAAGAGATCCACAGTACAACAAAGGGCTGGCCTTCTCTGAGAAAGAGAGGGATGCGCACTATTTGCGTGGTCTCCTGCCTCCCACAGTTACCACTCAGCAACTTCAGGAAAGGAACGAAAGGCTGTTTTACAAACTTCTCGTTGATAATGTTGAGGAATTACTCCCAATTGTATATACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGAAGCATATTCAAGCGTCCGCAGGGTCTTTACATTAGTTTGAAAGAGAAGGGTAAAATCCTTGAGGTTTTAAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGCGGATTTTGGGACTTGGGGATCTTGGATGTCAGGGGATGGGAATTCCTGTTGGTAAATTGGCTTTGTACACGGCACTAGGAGGAGTTCGTCCTTCAGCCTGTTTGCCTATCACTATCGATGTCGGGACAAATAATATGAAATTACTGAATGATGAATTTTACATTGGGCTTAGACAAAAAAGGGCAACTGGAAAGGAATATTATGAACTTCTGCATGAGTTTATGACTGCTGTGAAGCAAAACTACGGGGAAAAAGTTCTAATACAGTTTGAAGACTTCGCAAATCACAATGCTTTTGAGTTGCTTGCTAAATATGGTACAACTCATCTTGTTTTCAATGACGATATACAGGGAACTGCATCTGTTGTTTTATCTGGTGTTGTAGCGGCCTTGAAGCTCATTGGTGGTACCTTGGCTGAGCACACATTCCTTTTCCTTGGTGCTGGAGAAGCAGGAACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCAAAACGGACTAAGGCACCTATAGAAGAAAGTCGGAAGAAGATATGGCTTGTAGACTCAAAGGGTTTACTTGTTAGTTCGCGGAAGAACTCACTTCAACATTTTAAGAAGCCTTGGGCTCATGAACACGCTCCTGTTAATAGTCTTCTAGAAGCTGTTAAGGTGATCAAACCTACAGTTTTGATTGGATCATCTGGAGCGGGAAGAACATTTACAAAGGAAGTAGTTGAGGCAATGGCTTCAAACAATGATAAACCTCTCATTATGGCTCTCTCCAATCCTACCTCACAGGCTGAGTGTACAGCTGAAGAGGCTTACCAGTGGAGTGAGGGCAAAGTTTATGCTTCTGGCCAGGCCAACAATGCTTACATTTTCCCAGGATTTGGTTTGGGTTTAATAATCTCTGGAGCAATTCGAGTACATGACGAAATGCTTCTAGCAGCTTCGGAAGCCTTGGCTAAACAAGTGAGTGAGGAGAACTACAAAAATGGTTTGATTTATCCACCATTCTCTAATATTAGAAAAATCTCAGCTAATATAGCTGCAAATGTTGCTGCCAAGGCATACGAACTAGGCTTGGCTACCCATCTTCCCCGTCCTCAGAATCTTGTGAAGTACGCTGAGAGTTGCATGTATACCCCTGTCTACCGCAACTATAGGTGAATGATCGAGGGCAACTAACTATTGGTTATATCCACTTTTGTCTTTAATACATAAATTATTAAGGATGTGTTTCTTGTCTTATTTATTTATTTATGCACATTCAAGAACAAACAATTTTATGCTTGAACTAGTGTTTTTTCTATTATCATATATCAATGACCCTAGTCATTTCATTTCCCTTGGCTTTCTTTGCATTTTTTTAAGCCTACTGTACCATATGTTACTGCCTTTCTA 1947 0.4227 MLRISSKDKARNNIEGAEDRKMESTLKHLRDGESVLDLSPTSAVSGGVVDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFSEKERDAHYLRGLLPPTVTTQQLQERNERLFYKLLVDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNMKLLNDEFYIGLRQKRATGKEYYELLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLSGVVAALKLIGGTLAEHTFLFLGAGEAGTGIAELIALEMSKRTKAPIEESRKKIWLVDSKGLLVSSRKNSLQHFKKPWAHEHAPVNSLLEAVKVIKPTVLIGSSGAGRTFTKEVVEAMASNNDKPLIMALSNPTSQAECTAEEAYQWSEGKVYASGQANNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAKQVSEENYKNGLIYPPFSNIRKISANIAANVAAKAYELGLATHLPRPQNLVKYAESCMYTPVYRNYR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00478 570 SMART Malic_M_2 303 539 IPR012302 GO:0051287
Pste3g00478 570 Gene3D - 301 570 - -
Pste3g00478 570 Pfam Malic enzyme, N-terminal domain 112 292 IPR012301 GO:0004471
Pste3g00478 570 PANTHER MALIC ENZYME-RELATED 109 569 - -
Pste3g00478 570 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g00478 570 FunFam NADP-dependent malic enzyme 1 109 297 - -
Pste3g00478 570 Gene3D - 111 300 IPR037062 GO:0004471
Pste3g00478 570 CDD NAD_bind_1_malic_enz 303 564 - -
Pste3g00478 570 SMART malic_2 112 293 IPR012301 GO:0004471
Pste3g00478 570 PIRSF ME 49 112 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PIRSF ME 107 570 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 ProSitePatterns Malic enzymes signature. 299 315 IPR015884 GO:0004471
Pste3g00478 570 Coils Coil 7 27 - -
Pste3g00478 570 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 48 302 IPR046346 -
Pste3g00478 570 FunFam Malic enzyme 301 570 - -
Pste3g00478 570 Pfam Malic enzyme, NAD binding domain 303 538 IPR012302 GO:0051287
Pste3g00478 570 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 303 569 IPR036291 -
Pste3g00478 570 Gene3D - 71 110 - -
Pste3g00478 570 PRINTS Malic enzyme signature 118 142 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 274 292 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 178 207 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 214 236 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 330 346 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 299 315 IPR001891 GO:0004470|GO:0004471
Pste3g00478 570 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00478 Pste-Chr3 2745436 2750270 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00478 3 2745436 2750270 Pste6g00804 6 3090607 3095432 ECH
Pste3g00478 3 2745436 2750270 Pste3g03608 3 28388192 28394039 ECH
Pste3g00478 3 2745436 2750270 Pste2g02276 2 22921205 22925768 ECH
Pste3g00478 3 2745436 2750270 Pste3g00478 3 2745436 2750270 ECH