Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00472 ATGCATAACAATTCAAGGGAAATCTCTTCCTCATTTGGTTCACATTCATGCTTCTCCTCACAACCCACCAATGCCAACAACCCTCTACCACTCCCAAAAAAGCCACGTGGCAGGCCCCCAGGTTCCAAAAACAAGCCCAAATCCACTTGCTTGCATGTGACACCACAAGGTAGTGATCCATCCAAGAAGATCATTAAGGTGAATGTGAATCCAGGTAGAGATGTCATTGAGTCCATTGCAGATGTGGCTCGTCGAGATCATGTTAACCTCACTGTCCTAAGTGCCTCTGGCACCATCACAACTGTGATCCTTCGCACCTCAGCTGATAGTGCTACCCTTAGGTACCATGGACCCTTCACTTTACTCTCCCTCACTGGCTCAATCATCCGCCACCCTAGGGCTAACCATAACAATCCCGAATCCTTTCAGATCAACCTTCGCACCTCTCAGGGCCTTGTGTTTTGTGGCACCGTTGCTGGCGCAGTTGTCGCCGGCGACAATGGTTCAACATGGTTATATTCCATGGGTGGACACAGTGACAACATGGACGGGTGGATTCAACAAGAACACAACGAAGATCTACCAGTGTTCTTTTTGTTGGATGAAAAGATGTGTTAG 618 0.4822 MHNNSREISSSFGSHSCFSSQPTNANNPLPLPKKPRGRPPGSKNKPKSTCLHVTPQGSDPSKKIIKVNVNPGRDVIESIADVARRDHVNLTVLSASGTITTVILRTSADSATLRYHGPFTLLSLTGSIIRHPRANHNNPESFQINLRTSQGLVFCGTVAGAVVAGDNGSTWLYSMGGHSDNMDGWIQQEHNEDLPVFFLLDEKMC 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00472 205 CDD DUF296 67 165 IPR005175 -
Pste3g00472 205 MobiDBLite consensus disorder prediction 1 63 - -
Pste3g00472 205 ProSiteProfiles PPC domain profile profile. 58 198 IPR005175 -
Pste3g00472 205 MobiDBLite consensus disorder prediction 1 27 - -
Pste3g00472 205 Pfam Plants and Prokaryotes Conserved (PCC) domain 65 164 IPR005175 -
Pste3g00472 205 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 165 IPR014476 GO:0003680
Pste3g00472 205 SUPERFAMILY AF0104/ALDC/Ptd012-like 63 164 - -
Pste3g00472 205 Gene3D - 62 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00472 Pste-Chr3 2722743 2723683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00472 11 164 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.037 2.95e-20 84.3