Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00461 ATGGGTGAGCTACCCAGCTCATCATCATCATCATCACCCTCCTGCACTCGCAAGCATTCGACTTCATCAGAGGCCCATTTGGGTCAGAAAAGGGCGAAGCAGACAGCCCATAGCAGCGCCGTCTACAGAGGGGTCCGAATGCGGGCATGGGGAAAGTGGGTATCCGAAATCCGTGAGCCCAGGAAGAAGAACCGGATCTGGTTGGGGACCTTCGCCACCGCCGAGATGGCCGCCCGTGCCCACGACGTCGCCGCCCTCGCCATAAAAGGCAACTCCGCTATTCTCAACTTCCCCGACCTCGCCGCCTCCCTTCCCCGACCCCACTCCAACTCTCCCAGGGACGTTCAGGCCGCCGCAGCCAAAGCCGCCGCCATGGAGCTTCTCGATCCTCCGACCACTCCACTGTCGCAGTCTTCTTCGTCTTCCTCATTGGCTGCTTCCAGTGATGACCCGGAGGAGCTGGGTGAGATAGTGGAGCTGCCGAGTCTGGGAACGAGTTTTGAAATACCGGACCCTGTGTTTTTGGAGCCCCCGGAGGGATGGGGCATTGGCATTTATGATGAGAGGGACTGTGGAAGCTATTTTATTGGGGAAATGCAGGAGATTCTTTCTGGTTTTGATGCTTCTTTGTGGCAGCATTAG 642 0.5763 MGELPSSSSSSSPSCTRKHSTSSEAHLGQKRAKQTAHSSAVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPDLAASLPRPHSNSPRDVQAAAAKAAAMELLDPPTTPLSQSSSSSSLAASSDDPEELGEIVELPSLGTSFEIPDPVFLEPPEGWGIGIYDERDCGSYFIGEMQEILSGFDASLWQH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00461 213 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 MobiDBLite consensus disorder prediction 131 148 - -
Pste3g00461 213 MobiDBLite consensus disorder prediction 129 152 - -
Pste3g00461 213 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 MobiDBLite consensus disorder prediction 1 39 - -
Pste3g00461 213 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 165 - -
Pste3g00461 213 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Pste3g00461 213 MobiDBLite consensus disorder prediction 1 36 - -
Pste3g00461 213 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Pste3g00461 213 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Pste3g00461 213 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00461 Pste-Chr3 2630819 2631460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00461 20 169 AP2-EREBP Transcription Factor Family AT5G11590 57.407 3.79e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste3g00461 AP2 2.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00461 3 2630819 2631460 Pste3g00461 3 2630819 2631460 ECH