Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00459 ATGGATATTTCCTTTTCCTCTGACTCAGATTCTTGGTTCTCCTTGGACAATCACCATGCCTCTTCCTCCCAACATTATGGTTCTACATCACCACCTACCACTACCAATTTATCTTGGGAAAATGTTCTTGTTCCCAAGAAGCGACGTGGTAGGCCTCGTGGTTCCAAAAAGATACTTAAACCCACTTCGAAGTCCATGGAACCCCAATCAATTGAGCCTTTTGCTAAGATTATCAAGGTTGATGTGACTCCTGGAAAGGATATCATTGAATCCATCACTGATGTTGCTCGTCAGGATCATGTTAGCCTCACCATCCTCAATGCTTCTGGAATGATCACTGATGTGAACATTCACACCTCACCCGATAGCACTGCTCTTAGGCTCCAAGGACCATTTACTTTGCTCTCCCTCACTGGAACCTACATATACAAAAACCATTACACACTTCATCCTGGGGCCACCCCTCCACCTCCCTTATCCTTTGGGATCAATCTTTGCACTTCTCAGGGCCAAGTATTTGGTGGCCCAATTGTTGGCACAGTTGTTGCCGATGGCGGTGGTGATGAAGCATGA 573 0.459 MDISFSSDSDSWFSLDNHHASSSQHYGSTSPPTTTNLSWENVLVPKKRRGRPRGSKKILKPTSKSMEPQSIEPFAKIIKVDVTPGKDIIESITDVARQDHVSLTILNASGMITDVNIHTSPDSTALRLQGPFTLLSLTGTYIYKNHYTLHPGATPPPPLSFGINLCTSQGQVFGGPIVGTVVADGGGDEA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00459 190 CDD DUF296 82 183 IPR005175 -
Pste3g00459 190 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 185 IPR014476 GO:0003680
Pste3g00459 190 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 183 IPR005175 -
Pste3g00459 190 MobiDBLite consensus disorder prediction 16 66 - -
Pste3g00459 190 ProSiteProfiles PPC domain profile profile. 72 190 IPR005175 -
Pste3g00459 190 MobiDBLite consensus disorder prediction 16 41 - -
Pste3g00459 190 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 184 - -
Pste3g00459 190 Gene3D - 75 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00459 Pste-Chr3 2614520 2616187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00459 25 185 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.379 8.34e-13 63.5