Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste3g00443 | AGTGGTTCTTATGGCTTCTTCGCTTCGACCCACTCTCTCCTCCCTTAGCTTCTCACCACCTTCTTCTCTTTCTCTTTTCAACCCTTCTCGCCGTATCTCTTTCTCAAATCTCCCTTCTCTGTCTCAATCCTATAGTTTTGGTCTGCATGCTTCCAGATTGTTGAGACACGATGGTAATTCCCTGAGAGTCTCGGCATCAGTTGCCGCTGCTTCACCAGAAAATGTGCTTGAGTGGGTCAAACAGGACAAGCGAAGAATGCTCCATGTTGTATATCGTGTTGGAGACTTGGACAGGACCATAAAGTTTTATACTGAGTGCCTCGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAAATATACCAATGCCTTTCTTGGATATGGGCCCGAAGACTCTCACTTTGTTATCGAACTCACATTCAATTATGGAGTTGACAACTATGACATTGGAACTGGATTTGGCCATTTTGGTATTGCCGTTGAAGATGTTGCAAAAGCCGTGGACCTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGGCGTTCAGTAATTGCTTTTATTGAAGATCCTGATGGGTACAAATTTGAACTTATAGAAAGAGGTCCCACTCCTGAACCCTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCCATAGAGTTTTATGAGAAGGCATTTGGTATGGAGCTGCTTCGCACACGAGACAATCCAGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCTGAAGATAAAAACACCGTTCTGGAGTTGACTTACAATTATGGAGTCACAGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCTGAAGCAATTAAACTAGCTGGAGGAAAGGTTACCCGGGAACCTGGACCATTG | 949 | 0.4415 | MASSLRPTLSSLSFSPPSSLSLFNPSRRISFSNLPSLSQSYSFGLHASRLLRHDGNSLRVSASVAAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTFNYGVDNYDIGTGFGHFGIAVEDVAKAVDLIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKNTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLAGGKVTREPGPL | 313 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste3g00443 | 313 | CDD | GlxI_Ni | 83 | 204 | - | - | |
| Pste3g00443 | 313 | ProSitePatterns | Glyoxalase I signature 1. | 85 | 106 | IPR018146 | GO:0004462|GO:0046872 | |
| Pste3g00443 | 313 | PANTHER | LACTOYLGLUTATHIONE LYASE | 64 | 313 | - | - | |
| Pste3g00443 | 313 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 82 | 206 | IPR037523 | - | |
| Pste3g00443 | 313 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 212 | 313 | IPR037523 | - | |
| Pste3g00443 | 313 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 213 | 311 | IPR029068 | - | |
| Pste3g00443 | 313 | Gene3D | - | 209 | 313 | IPR029068 | - | |
| Pste3g00443 | 313 | Gene3D | - | 57 | 207 | IPR029068 | - | |
| Pste3g00443 | 313 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 83 | 203 | IPR004360 | - | |
| Pste3g00443 | 313 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 215 | 311 | IPR004360 | - | |
| Pste3g00443 | 313 | NCBIfam | lactoylglutathione lyase | 82 | 207 | IPR004361 | GO:0004462|GO:0046872 | |
| Pste3g00443 | 313 | ProSitePatterns | Glyoxalase I signature 1. | 215 | 236 | IPR018146 | GO:0004462|GO:0046872 | |
| Pste3g00443 | 313 | FunFam | Lactoylglutathione lyase | 79 | 208 | - | - | |
| Pste3g00443 | 313 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 81 | 211 | IPR029068 | - | |
| Pste3g00443 | 313 | ProSitePatterns | Glyoxalase I signature 2. | 149 | 161 | IPR018146 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste3g00443 | Pste-Chr3 | 2553246 | 2556179 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste3g00443 | 215 | 310 | Calmodulin-binding Proteins | AT1G08110 | 27.273 | 1.42e-08 | 52.8 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste3g00443 | 3 | 2553246 | 2556179 | Pste3g00443 | 3 | 2553246 | 2556179 | ECH | |
| Pste3g00443 | 3 | 2553246 | 2556179 | Pste9g01585 | 9 | 16086588 | 16089875 | PCT |