Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00440 GTTCCTTTGGCATCAAGAATCATTCTTCAGCATCTCTCTGGTATTCCTTCTCCTTCTCTCTCTCTTCATTTCTCGTTTCTTCTATTGTATGGTTCTGCGTTTACGCCCAAACCACTATAGTTTCTTGTATACCTTTCTTCTGGATCTGTCACTATGACTTCCTCACTCGTGAAGATCCAAGGCGAAGAGGTCCTCTCCAACGAGTTTCAGGACCTTTCAATCAAAGATCTGAGTGAGAAAGAGAGTGAGGCAAAGATGCACGATGTGGGGTATGGAAACCATGGGGGAATCTGTGCTATTTGCTTGGATAAGATAGTCCTGCAGGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCATACTGTGTAACATGCATCCTTCACTGGGCTACATACCGTGAGAAAGTTACCTGCCCTCAGTGTAAGAATCCATTCGAGTTCCTTAATGTCCATCGCTCACTTGATGGCAGCATTCAAGATTACATGTTTGAGGAGAGTGTTTGCCTGCTACTTCGAGCCTCATGGTTCAGACCTTTATCAGTTGAAGAACACATGGTTCATGAAGATGCATACGAAGACCTAGAAGAGTACTATCAGTATGAGGATGATGACGATGACGATGATATGGCTGTCTATTATGCTACCGTGCCCAATTTGCGCGTTATTGGCAACCGTAGATGGGGAGACAACGGTTATGTTAGGGCTGGTCGTCAAGAAGCTCGGCCGGTCCATCGTCCAAACTTCCAGGATTCAGTAGCAAGTTCATCACGTGAACCAAAGAATAAAGAGGCTGGGAAAATCATCACTGGCAGAAGGGCAAAGAGGGCACAGAAAAGGGAAGCCGCAGACAAAGCAGCAGAAGCAAAGCATCAGAAGCATTTGATAAGGTTGGGTCGGAAATGATTCTATTTTATTATTATGCAGACCATGGCCTTGAACTCTCCTTCCCATAAGTTTATATAATTTCATTTTCTTCACATTTTTTTCTTGTACATTGTTTCTGTCTCTTCTACTCTTAAGCATGTAATAGATCTTGGGGAAGGTGTTTTAGAATAATAGCTTGGTGGGGTGGGTTGGATTATGGAATTCGTCACTCACTATTGAACAATTTAGGTTTTAGTTAGTTATTATGCTCTCTATTCAGGTCTAAGTTGTACATAATTTCTGTGACATTGATACCTATCATTCTCTTCAAAGTGAAGAAATCCAAACACAAAAAATACTAAAAGGCAACCGATGTTGCGTACAAGGCCTGAAAGTTATCCTGAAAGATAATGGTAACCAGTT 1284 0.4206 MTSSLVKIQGEEVLSNEFQDLSIKDLSEKESEAKMHDVGYGNHGGICAICLDKIVLQETALVKGCEHAYCVTCILHWATYREKVTCPQCKNPFEFLNVHRSLDGSIQDYMFEESVCLLLRASWFRPLSVEEHMVHEDAYEDLEEYYQYEDDDDDDDMAVYYATVPNLRVIGNRRWGDNGYVRAGRQEARPVHRPNFQDSVASSSREPKNKEAGKIITGRRAKRAQKREAADKAAEAKHQKHLIRLGRK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00440 248 MobiDBLite consensus disorder prediction 204 240 - -
Pste3g00440 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 248 - -
Pste3g00440 248 MobiDBLite consensus disorder prediction 186 248 - -
Pste3g00440 248 CDD RING-HC_Topors 47 93 - -
Pste3g00440 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 113 IPR013083 -
Pste3g00440 248 SUPERFAMILY RING/U-box 46 96 - -
Pste3g00440 248 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Pste3g00440 248 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
Pste3g00440 248 Pfam Ring finger domain 47 90 IPR001841 -
Pste3g00440 248 Coils Coil 219 239 - -
Pste3g00440 248 SMART ring_2 47 89 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00440 3 248 C3H Transcription Factor Family AT5G19430 56.420 3.52e-86 255