Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00438 CACAAGGTAATAAGAAACAAAGAAGAAGCAAAAAGTATATTCAAATTAAAACCCGCTAATAACTGTATGGTACTTGGGCGTTTGTTTTCTTCTTCTTCTCCTCGCTACTCAGTTCAGTGCCCTGAGTAGAGGCTCCTTTCAGAAAACTGAAACCTAGGGTTAGGGTTAGGTTTTTCGTTTTCGTGCTTTGCCATGGAAGCCGCAGTGGTTGACCCCGGTTCCAGCCTCCTCAAAGCCGGTTTTGCGATTCCCGATCAATCTCCCGCCATGGTAATTCCTACCCAGATGAAGCGAATGCTTGATGATGACGTTGCCGTGGATGATTTTGCGGTTGATCCGGTGTGCCGAGGCTACGTCAGAGATTGGGATGCCATGGAGGATTTGCTGCATTATGCTAACAAGGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCCTCTGAACAAGCAGTGTTGTCGCTATATGCTGTAGGACGTATCTCCGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCAGTGATTGAGGGTGCTGTTAACCACATTGCGTCAAGAAGATTTGAGTTTGGAGGTATTGATCTAACTAATTTCCTGGCTCAAGAACTTGGCAAATCCAATCCGCTAGCGAATATCAGCATCTCTGATGTTGAGAAAATAAAACAGCTATATTCATGCTGTGCTGAAGATGAATTAGCTTATCAAAAAACCCAATATTCTTGCCCTGTGGAGACACATACCCTTCCTGATGGACAAGTGATTACCATTGGAAGAGAAAGATATACTATTGGCGAAGCTTTATTCCAGCCATGTCTACTGGGTTTAGAGGCTCATGGCATTGTTGAGCAGCTTGTCCGTACTATTTCAACTGTGTCATCTGATAATCATAGGCAACTTCTTGAAAATACTGTGGTTTGTGGTGGTGCTTCTTCTATGACTGGTTTTGAAGAGAGATTTCAGAAAGAATCTAGTCTAAGTTCATCTGCTATTCGACCTACCCTAGTAAAGCCTCCAGAGTACATGCCTGAAAATTTAACCATGTATTCTGCTTGGGTGGGAGGCGCCATTCTTGCCAAAGTAGTTTTTCCTCAAAATCAACATGTAACCAAGGCAGATTATGATGAAACTGGGCCTTCTATTGTTCACCGGAAATGCTTTTGATGGAATTAATCTGCACCATTTCCTCAATCAGCAGTTCCTTTACACTTGTATTGGTACATGTGGTAGGCCTTCATTTGACTTTAGATTCTAAATGGTAGACTTGCTAGATGTCCAGATGCTCACTTATTTTAAAAAACTGTAGTGGATCTCCATTAATTAAATTCAATCATATTTTAGGCACCACAGGTAGATTATTTCAGTAAAATCTTGTTCTGACAAAATCATATAATGTATGTTGCAGCTATAGCAGCTTGCTTATCTTTGTAATGAGCAAGCCTCCAAAAGAATCAATTTGGTCCTCAGTTGTCTCTACTAGCACAG 1506 0.411 MEAAVVDPGSSLLKAGFAIPDQSPAMVIPTQMKRMLDDDVAVDDFAVDPVCRGYVRDWDAMEDLLHYANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGIDLTNFLAQELGKSNPLANISISDVEKIKQLYSCCAEDELAYQKTQYSCPVETHTLPDGQVITIGRERYTIGEALFQPCLLGLEAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGASSMTGFEERFQKESSLSSSAIRPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSIVHRKCF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00438 330 Gene3D - 92 293 - -
Pste3g00438 330 SUPERFAMILY Actin-like ATPase domain 100 330 IPR043129 -
Pste3g00438 330 Gene3D Actin; Chain A, domain 4 134 221 - -
Pste3g00438 330 CDD NBD_sugar-kinase_HSP70_actin 4 137 - -
Pste3g00438 330 PANTHER ACTIN 68 323 IPR004000 -
Pste3g00438 330 SUPERFAMILY Actin-like ATPase domain 2 107 IPR043129 -
Pste3g00438 330 FunFam Actin-related protein 7 134 221 - -
Pste3g00438 330 Gene3D - 69 324 - -
Pste3g00438 330 Pfam Actin 68 330 IPR004000 -
Pste3g00438 330 Gene3D - 1 68 - -
Pste3g00438 330 SMART actin_3 1 330 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00438 Pste-Chr3 2526961 2544672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00438 1 330 Cytoskeleton Gene Families AT5G09810 35.714 9.51e-63 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00438 3 2526961 2544672 Pste3g00438 3 2526961 2544672 ECH