Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00426 GCCCTCGCTCACATGTAACGGGATGCTACCTATCTTCACACCTTCATGTGACTTTATAGAAGAGGGTCCATAAAATTACAAAAACTATACAACAAAAGTCTTTATGCACGCTTTAAACATCTTTTCTATGCTCTCTCTACAACTCTTCTCACATCAACCATTGTGATAATTGGAGAGAGAGACACAAAGTTCTCTTCTTTTTTGTTGGGTAGGAAAAACCCACCTACATTCACCTTCTCTTTCTCTCAAGCTCTTTAGTTTTAAGAAAATTAGAAGAAGTTCGTGAGAGAGAAACTAAAGGGTCAGCAAAGAAGAGATTCACAATAACATACCAGTTAGATTGTTGTTATTGTGATTGATAGGACTGTTATTGTGTTATTTTCTCTTCTCACTTATCACTGATCACTGCTCACTGCCCCTCTTTCTATGCTCAGTTCTGAACCATTCAGAATTTCATAACCCCATTTTTCTTTTCCCTTTCTCTCTCTCAGTTAGCAGTAGCAGAAGATGGATAACAAGGCATGAGAAGCAGACACACACAAGTGCTGAAAAAACCACTCAATAATTCCATCACACTCTTCCTATACTTTCTTAAATCTGATACACTTGCAGAGACCCCACTTCACCAAAATAACTCCCACATAAATAGATTTTCCTTCCATACCCCTCAGAAGATCCACCAACCTTTAGTTCACAGTCAGACAATCATAACCAACTCCTTAGTTACCCAAGATCATATCTATATGTCTATGTAAATAAACTATATATTTTCTGGCATATGTGGATCAGCTCACATAGAATTGTTTCCCTTTGATTTCATTACTGTGTGATGTATGTATGAGTTTACCTGATTCCAACAGAATTGTCTTGTTTGGAATACCAACTATCAGTTGTGGCTACTACAAGGAGATTCCCGTCGGATTCTGGAGCCTTTGCTGATTGGTCAGCGGCTGCCTCTGCTGTTGGCCGCGGTGATGACCTTTCACTCGGCTTCAATGCATCATCCGCCGTCACATCAAGTGGCGCCGGAATCATGTGGCCAGCAGCGTCGAGGTCATTCACCTACAACCACCACCACGATATCTTCTTGATGACACCGGCCTCGTCGTTTCACAACGACGCAGTTTTGTCCGATCCAAACAATGGATCGAACAACCCTACAACTGCACTTGGGGTCAATGTTTTTCCTCTCCTGACAGCCGCACCATGCTTTACTGCTTCGCAAAGTAGTGAAAGCCTAATGGAAAATATAAACAACAATAACAACCGTAATACAATTCAATTGTGGCAGGTACAAGAGTCTCCGCCACAACAGCATCACCATCATCACGGTGCACCAGACGACAACGTGATGATGGGACGTAACAGAATTCAGTTATGGCATGAGCACGACTCACCACCTCCACCCTCACACAAAGGTGATACGTGTGGAGATGGAGGTTTGGGTGTCGGCACGTGCCAAGACTGTGGCAATCAGGCCAAGAAAGATTGTAGCCATCGGAGGTGCAGGACGTGTTGCAAGAGTAGGGGTTTTGATTGCGCCACGCACGTGAAGAGCACGTGGGTGCCGGCAGCGCGGCGGAGGGAGCGGCAGCTCATGGCGGTGTCCATGCCTGGTGTGGGGTCCACCGTGGCCACTTCCGGTGGCAAAAAACCTAGGCTTGGTGTTTCACAAACTACTACAACTTCGCACACTTCAACGTCTAATAACACAACTCCTCCTAGGAGTTTTGACACAGATTCTAGCCACCAAGATGTGGGTTTCAAGGAGTCATTACCATGTCAAGTGCGTGCACCAGCAGTGTTCAAGTGTGTTCGTGTGACAGCAATGGAGGATGGAGAAGATGAGTATGCATATCAAGCAGTGGTGAAAATTGGTGGGCATGTGTTCAAAGGGTTTCTCTATGATCAAGGGGTTGAGGACAAAGAAGACTGTCCTAATCTATCTGAATTGCATTTGGGTGGTGGTGGAAATGTTGCAAGTGGAAATGATCATGGTGGTAGAAATGGAGTTTCATCTTCATCTCCAATGGTGGATCCTTCTCATGTCTATGGTGGTGGAGGATTACTTGGAGGTTCATCAAATTATGGTAATCCAATAAATTAAAAGCAAAAAAACATAGATACAAAATTGTAAGTTTTTTGGTGGTGTTCTCTAATTAAATTTAAAATTTGAGAAATGCTAAATGCACCGGTTCAGGCACTGAAAATATTAACTTTTTATGTATATGAATTTTAGAGAATTAGGTGATAAATTTTATCATACATAAAGAGTGATTAAAATGTTGGTGTAAAACTTTTTTATATTATTAATGC 2316 0.4249 MWPAASRSFTYNHHHDIFLMTPASSFHNDAVLSDPNNGSNNPTTALGVNVFPLLTAAPCFTASQSSESLMENINNNNNRNTIQLWQVQESPPQQHHHHHGAPDDNVMMGRNRIQLWHEHDSPPPPSHKGDTCGDGGLGVGTCQDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLMAVSMPGVGSTVATSGGKKPRLGVSQTTTTSHTSTSNNTTPPRSFDTDSSHQDVGFKESLPCQVRAPAVFKCVRVTAMEDGEDEYAYQAVVKIGGHVFKGFLYDQGVEDKEDCPNLSELHLGGGGNVASGNDHGGRNGVSSSSPMVDPSHVYGGGGLLGGSSNYGNPIN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00426 357 MobiDBLite consensus disorder prediction 321 335 - -
Pste3g00426 357 Pfam Domain of unknown function (DUF702) 141 296 - -
Pste3g00426 357 NCBIfam LRP1 C-terminal domain 248 295 IPR006511 -
Pste3g00426 357 MobiDBLite consensus disorder prediction 195 240 - -
Pste3g00426 357 NCBIfam putative zinc finger domain, LRP1 type 141 183 IPR006510 -
Pste3g00426 357 MobiDBLite consensus disorder prediction 312 342 - -
Pste3g00426 357 MobiDBLite consensus disorder prediction 208 237 - -
Pste3g00426 357 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 59 340 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00426 Pste-Chr3 2467240 2470992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00426 142 339 C2H2 Transcription Factor Family AT5G12330 65.366 9.48e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste3g00426 DUF702 1.7e-60 No_clan