Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00414 AAGAAAAACAATGAAAGGAAGAAAGAAAAGAAAAGAAAAGAAAAGCAATAAAGAAAAGGAAGAAAAGAGAGAAAAAGGTTCTCAAAACTCCATGATTATTGAAATTCTCTCAAAAACAGTACCAAGCAGTAGTAGTGTTCCCCTTACTTAATCAACCAACAGGAGAGAACCTCTACAAAGACCCTGTTTGGGCTTGGATTGGAACAACATAAAGAGAGAGAGAGAGAGGAGACTTTCTTTTTTCTTTTCTAGAGATCATACAAGTTAAGAAAGGCATGAATAGAGGTGTCTTGCAAACTTCACCGGTGCAACAAATGATGGCCGGGAACCCTAATAACTGGTGGAACATCAACACCATGCGCCCTCCTCCTCCTCCTCCTTCTCCTTTCTTCTCCACTCCTTCCAACTTTATAACTCCATATGCCCCCTCTTCTTCTCTTCCTCTTCCTTCTTGGCATGACACCAGTCAAGAGCTACCTGAGTCATGGAGTCAGCTACTCATGAGCGGGATGGTGTCAGAAGAAGACAAAGGGGGTATGTGCCAGGTTCAGTCTAAGAAGTTGGAGAACTGGGAGCAACAAATGCTAAGTCAGGCTCCAAGTGCTCCTATTGTTGATGTTAAGCAAGAAGGCTCCGTCAACAGCTATGTCTATGGTCATGGAAACGAGGAGTTTCAAGCAGCAAAGCCAACATGGCCTCAAATAGTTCCTGCTTCTTCCCCCAAATCATGTGTAACAAGTTTCAGCAGCAGCATGTTGGATTTCTCTAACAATAACACTGATGCGAGGCCTCCTCCTCCAGATCCATCTTCAGAGTGTAATAGCACAGCAGCTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACCGCCCACAACTCAGTCGACCTTCAAGGTTAGGAAGGAGAAATTGGGTGACAGAATTACAGCCCTTCATCAACTCGTTTCCCCGTTCGGAAAGACTGACACAGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGTTTACCATACTTGGGCAGTGGATCAGGAAACATGAGGCAGCAACAATCTGTAAGAAATAATATTAACACATTTCTGGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTAGTGAGCAGGACTCTCAAGAAGAAGCAAAGAAGGACCTAAGGAGTAGAGGGTTGTGTCTGGTTCCAGTATCATGCACGCTGCAAGTTGGAAGTGACAACGGAGCTGACTATTGGGCACCAGCTTTTGGTGGGGGATTTCGGTAGATTGGGTTAACTTACTATTTGATTAGCATATATGGCAGCATACAGAGCAAAATATATTCATGGAGATTGTATAACATCATTAGCAGTCAATCTGCTACAAAATCTAATTAAGGCTGATTGCTCATGATGCTATACAGCATTCCTGAATAAAGTCTATGCTGCATGCGCATCATGTCCAGTAGTATATATTTGCAAGTCCTTGTTAAGACTCCTTAATTCATCAAAATCAAGTTTTTATTTATTTTCACTAGCTTAATATGACGTACGTCTCATACAATGTCCTTACATTATATAATTAATGTATATATGTTCAATAATTGTATGGTTATGTCGAAAGCTACTTCT 1676 0.4177 MNRGVLQTSPVQQMMAGNPNNWWNINTMRPPPPPPSPFFSTPSNFITPYAPSSSLPLPSWHDTSQELPESWSQLLMSGMVSEEDKGGMCQVQSKKLENWEQQMLSQAPSAPIVDVKQEGSVNSYVYGHGNEEFQAAKPTWPQIVPASSPKSCVTSFSSSMLDFSNNNTDARPPPPDPSSECNSTAAGGAFKKARVQPPTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSGNMRQQQSVRNNINTFLVQGEKNCIFPEDPGQLLNENCLKRKAASEQDSQEEAKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGFR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00414 351 Gene3D - 203 256 IPR036638 GO:0046983
Pste3g00414 351 MobiDBLite consensus disorder prediction 163 201 - -
Pste3g00414 351 CDD bHLH_AtbHLH_like 203 252 IPR045239 -
Pste3g00414 351 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 68 333 - -
Pste3g00414 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 255 IPR036638 GO:0046983
Pste3g00414 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Pste3g00414 351 FunFam transcription factor bHLH68 isoform X1 202 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00414 Pste-Chr3 2290798 2294741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00414 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.110 3.91e-70 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00414 3 2290798 2294741 Pste3g00414 3 2290798 2294741 ECH
Pste3g00414 3 2290798 2294741 Pste9g01649 9 16962602 16975903 PCT