Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00413 TATGGAGAGCCAAAACCAACTTGAAGTTTCAAATTCTGAGCAACACAAGAAAGGAACTAACTTCTTTAAAACTTGTTTCAATGGAATCAACTCCCTCACAGGTATTGGTATACTGTCAATGCCATATGCAATTTCTCAAGGAGGGTGGTTGAGTTTTATTCTACTACTTCTTTTTGCGTTGATATTTTGGTACACCGGGTTACTTTTACAAAGGTGTATGAACAAGAATTCATTGATCAAATCTTACCCCGACATAGGTGAGGTTGCTTTTGGGTACAGAGGAAGAGTTTTGATTGCTACATTCATATATGTAGAGTTGTTTTTAGTTGCAGTTGAGCTTCTGATATTGGAAGGTGACAATCTAGAAAAATTGTTTCCAAACATGAACTTCAAGATTGGTGGCCTTAGAATTGTGGGAAAGAGTGGTTTTGTGCTGCTAGCTGCTTTGGTGATACTGCCAACAACATGGTTGAGAAGTTTGGAAGTTTTGGCCTATGTTTCTCTTGGTGGGGTAGTGGTTTCTATTATTTTAATTGGTTGTATTGTGTGGGTGGGTGAAGTTGATGGTGTTGGTTTTGATGAAAGAGGCCACTTAGTAAATTGGGAGGGGTTGCCTACTGCAATGAGCCTTTTTGCATTTTGTTACTGTGCACATGCAGTTTTGATTGTTTGCTTTGTGTCAAGCACTGTTATCTATGGAACCATAGCAGTTTTAGGCTACATGATATTTGGAGATTATTTGATGTCTGAAATAACCTTAAATCTACCCTCAAAGAAAATAAGTACTAAAGTAGCTGTTTACACAACAGTAATCAACCCTTTCACTAAATATGGTGTTCTGACAACCCCAATTGCAAATGCTATTGAAGAAAAATGGCTTCTATGCAAGAGAAAACCAATTGCCATTTTTGTTAGAACAACCATTCTGGTTGGTGCTGTGCTTGTGGCTCTATTCATGCCATTTTTTGCTTACATTATGGCATTTATTGGTGCATCTTTTAGTGTGACAATCTCAATGTTGTTCCCTTGCATCTGTTACCTAAAGATGAACAAAACTGCTAGGCAATTTGGATTCGAGTTTATCATCATAATTATAATTCTTGTAATAGGTACATTCATTGGAATACTAGGTACTTATGTCTCTATAAAACACATAGCAAATCATCTATAGCCATGAAGGTGTCATCCTAAATCATCAACTCTATTAATGATGTACGAGTACC 1223 0.3688 MESQNQLEVSNSEQHKKGTNFFKTCFNGINSLTGIGILSMPYAISQGGWLSFILLLLFALIFWYTGLLLQRCMNKNSLIKSYPDIGEVAFGYRGRVLIATFIYVELFLVAVELLILEGDNLEKLFPNMNFKIGGLRIVGKSGFVLLAALVILPTTWLRSLEVLAYVSLGGVVVSIILIGCIVWVGEVDGVGFDERGHLVNWEGLPTAMSLFAFCYCAHAVLIVCFVSSTVIYGTIAVLGYMIFGDYLMSEITLNLPSKKISTKVAVYTTVINPFTKYGVLTTPIANAIEEKWLLCKRKPIAIFVRTTILVGAVLVALFMPFFAYIMAFIGASFSVTISMLFPCICYLKMNKTARQFGFEFIIIIIILVIGTFIGILGTYVSIKHIANHL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00413 389 PANTHER OS05G0424000 PROTEIN-RELATED 27 368 - -
Pste3g00413 389 Pfam Transmembrane amino acid transporter protein 18 222 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00413 Pste-Chr3 2275971 2278861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00413 1 385 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.444 1.35e-124 363