Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00399 CGAAGGCGAACACCAACAACGCAACATCACCAACAAAGAAACACAACGCAAAGCCCCTCTCTTCTCTTCGCTTCTCTTAATTGCAGACTTCTTCTTTTTTTTCCCTTTCTCTTGTTGTGTTGTGTCGGTGTTTGGATCGAATTATCTTGATTCGGGAGCTGAACGCAGAGTCGCGTGGGGTTTGGATCTGAAACCAGTGAATTTGAGCTTAATTTTTGTTGAATTTGTAGCTGATTATTGTTGTTCCAATTATCAATAATCAGCGACTGGAGTGAGGTTGTCACTTTTTTTTTTTTTTTTTAATTTTGAAATTATTGTGTTGATGGGGGAGGGTGAAGGTGAGGGGAGTGAAAGCGCCCCCAAGAATGTTGTGTCGAACGACGTCGTTGCGAATGCGCTGTTGCCGTCCGATGTTCCCGCCAAGAAGCTCGCCAGGCAGCTCGATTTCACCGGCTTCGGCGGGATGCCGGCGCCGCCGGTGGGCTTGCCTCTCCCGCCTTCTGCTTCCGTCAGGGTTGGGAAACCAGAATCTCCAAAATCTAGATCGAGGCCTGGCTTTGAAATTAAAGAAGCTACTCCGAAGAAGCAGAAGCAGTGCAACTGTAAACATTCAAAGTGCTTGAAGCTATATTGTGAATGCTTTGCTTCGGGAATATATTGCGATGGTTGCAACTGTGTAAATTGTTATAACAATGTGGAAAATGAAGCTGCTAGACGAGAAGCAGTTGAAGCTACTTTAGAACGAAATCCAAATGCATTTCGGCCAAAAATAGCGAGTAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGGGAAGTTTTGATATTGGGAAAACACAACAAGGGATGCCATTGCAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAGGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAACATGGTATATATTCAGCAGGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATTCATCACCGCCAATATCAAAGAAAAGAAAAGCTCAAGAGCTCTTATTTGCGCCAACCGTCAAGGATCCATCAGTTGGCAGGCCGGGACAACAGGCAAACAATGTCAGAGTTCCTGCACCCTCCTCTTCGTTGTCACCTATCCCAGGTGCTCGTGTTGGACCAGCTACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTTTTAGCAGACATCATACAGCCACAGCACCTGAAGGAACTTTGCTCAGTTCTGGTGCTAGTATCTGGACAAGCAGCTAAGACATTTACAGACCAGAAAAATTTAATGGATAAGCACGCAGAAGATCAGACAGAAACTTCTCTTGCTTCTTCAACTCAGGAGCAATTGCCATGCCAAAAGGAAACTAATGTTGAGAAAACTATGGCTGATGATGATTGTTCGAGTGCAAACCAGACAGATAAAATCAGCCCAGATAATTCTTCTTCAGATGGTGCTGATGTACCAAAAGGGAGGCCAATGTCTCCAGGAACTTTAGCATTGATGTGCGATGAGCAAGATACGATGTTCATGACTGCTGCCTCCCCTGCTGGATCAAGAGCACATGCTTGCAACACATCTTTGCAACCACCTTATGGACAGGGAATGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGACAAAATTTAGAGATTTTCTCAATAGAGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTGGCCAGATGTGAATTAGAGAGTCAAATGGACCCAAACGTCAATTGCACTGGAAATGCCAGTATTGAGACAAAGCATCCGCAAGGTGCCACTACTAATAACGATGTTGCCAAATCTGCGGGCAACTCCATTACTTCTAAATCTTCGTTCCCTGGTAGTCTTATTCCTGAAAACGGGGAAACTTATCCGAAGGTTGAAAAGTAGATATGAAAGGAATCTAACTTAGACGAGCAGGGGTAACTCTGGAAGAAAAATTAGAAGAATATTGTGTGAAGGTATGCTACAACTCCGAAATGTAAAAACACTTGCATTCTTCATTATATTGCTTTTCTTTGAAAGGGGTATCAGCTGTCAATTGTCAAGCACATATTCCCACCTAGGATCAATTTTTTCAGTTATCAAATTTCTTCTTCTACTTCCATCATTCAATTATAGAAATCTGAATTAATTGCTCTGCTTCTACATAACTTGTAAATTGCAGGCTTGTAATTTCATAAAAGAAGC 2299 0.4276 MGEGEGEGSESAPKNVVSNDVVANALLPSDVPAKKLARQLDFTGFGGMPAPPVGLPLPPSASVRVGKPESPKSRSRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGYSSPPISKKRKAQELLFAPTVKDPSVGRPGQQANNVRVPAPSSSLSPIPGARVGPATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKNLMDKHAEDQTETSLASSTQEQLPCQKETNVEKTMADDDCSSANQTDKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPAGSRAHACNTSLQPPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARCELESQMDPNVNCTGNASIETKHPQGATTNNDVAKSAGNSITSKSSFPGSLIPENGETYPKVEK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00399 558 MobiDBLite consensus disorder prediction 351 419 - -
Pste3g00399 558 MobiDBLite consensus disorder prediction 383 404 - -
Pste3g00399 558 ProSiteProfiles CRC domain profile. 88 212 IPR005172 -
Pste3g00399 558 MobiDBLite consensus disorder prediction 268 298 - -
Pste3g00399 558 MobiDBLite consensus disorder prediction 48 80 - -
Pste3g00399 558 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 89 124 IPR005172 -
Pste3g00399 558 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 175 209 IPR005172 -
Pste3g00399 558 PANTHER TESMIN/TSO1-RELATED 52 484 IPR028307 -
Pste3g00399 558 SMART CXC_2 172 213 IPR033467 -
Pste3g00399 558 SMART CXC_2 87 127 IPR033467 -
Pste3g00399 558 MobiDBLite consensus disorder prediction 510 546 - -
Pste3g00399 558 MobiDBLite consensus disorder prediction 274 289 - -
Pste3g00399 558 MobiDBLite consensus disorder prediction 510 558 - -
Pste3g00399 558 MobiDBLite consensus disorder prediction 359 376 - -
Pste3g00399 558 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00399 Pste-Chr3 2135755 2142703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00399 1 498 CPP Transcription Factor Family AT4G29000 56.781 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pste3g00399 TCR 2.9e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00399 3 2135755 2142703 Pste3g00399 3 2135755 2142703 ECH