Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00383 TTTGAATTTGAAGTTGGAACCTGAAAGCATCAACTGATATTCAACCAAAGAACGAAACCACTATACAGTTTTTGTTGTTGGTTTTGGTTATACATATATATACATATATATACAGGCATTCACACCATTATTTCAATTTCGTTGCTAAAGCTCACTCTGTTCTTCAATCTCAGGCAAAGTGTGCCTTTGAAGGAATCAAGAATATCCAGTACTCTCAGATTTTAATGCCTGCCATGAAAAAGAATCCTGATCAGAATTGTTTTGGATCTGTGTTCAACAAGTTGGTAAAGGAGCTTGGTGAACCTGTAGACTTTGAACTTCCAGATTGGTTTCACAAATCAAAGCCAATGCAATACACCTATATAAAACGCAATATTTATCTCACTAAGAAGGTCAAGAGATCCCGGGTTGAAGATGATGGCATATTCTGTTCCTGTACTCCTTCCCCTGAATCTACTAGCGTATGTGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCATCAGGCTGCAAATGTGGGAACTCCTGTCTTAACAAACCATTTCAGAATCGTCCTGTGAAAAAGATGAAATTGGTTAAGACTGAGAAATGCGGTTCTGGAATTGTGGCCGATGAAGATATCAAGCTTGGGGAGTTTGTCATTGAATATGTTGGAGAAGTCATTGATGATAAAACGTGTGAGGAAAGGCTTTGGAACATGAAACATCGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCTACATACAAGGGAAACAAGTCAAGATACATCAATCATAGTTGCCGCCCAAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTTGTGACATACAGAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGAGTGTAGGCGTAAGCTGGGTGTCCGACCTACCAAGCCTAAAACGTCTTCAGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAGAATGGAGGTTTGCAAATTGGAAGTTCTCGAGTTGTTGACCAACCAAAGTGCTTACACAATTGCATTGGTGAAGTTATTAGGATAAAACAGATTGAAAATGAGAGGTTTGGAATTATTAAACGATTTGATAAATATTCTAGAAAACACTCGATCATGTTTGATGATGGTTGTGTTGAAATTTATGACATGTCCAAAGAGGACTGGGAACTTGTGAAGAATGATGCGAGTGTTATGTAGGAACTACTTAGTGAAGGTGCAGGTGAAAGGAATTGGAAAACTGAAAATGGGACTCGCTATTCTTTCATTGCATGTGCATAATTCTTGTAGTTGCTGAGACCTCATCAACAGAATATGAAGCAGGATACTTCAACACAAGTCTCACTGAATTGAAGATATTAATAAGTTTTGTTTTCTACTAACAAACTGTATCGTATTAGCCTAGAAGATTGTTGTTCGAGGTACTGGAAAAATAATCCTATGTAGTTGTTTCAAGTGTATACTTTTACTTTCTATTTTTCTAATATAAGGTTACTGATAAGTGAGGGAGTTCATACGAGGAAAAACAAGGAAGAAGCTTGTTTTAATATGCATTACTGTCATCAATGCTGAAGGCTTGTATCCTATAAAGTGGGGCACATTAACCTTGCTCTGCTTGGATTTGTATTGTAAGAGTCATTTTGATTACCTTGAATGGAAAACCGTGTTGCATTTAGTCTCTGTTGGGCATGACCGAGGCAAAGGGGCACCTTTGTAACGTAGCGTTTAGTTTTTTCTTTTCTGTTGAACATG 1844 0.3802 MPAMKKNPDQNCFGSVFNKLVKELGEPVDFELPDWFHKSKPMQYTYIKRNIYLTKKVKRSRVEDDGIFCSCTPSPESTSVCGRDCHCGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVKTEKCGSGIVADEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCRPNTEMQKWIIDGETRIGIFATCDIQKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKPKTSSDAALKLVAYQVYQNGGLQIGSSRVVDQPKCLHNCIGEVIRIKQIENERFGIIKRFDKYSRKHSIMFDDGCVEIYDMSKEDWELVKNDASVM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00383 355 PANTHER SET DOMAIN PROTEINS 35 271 - -
Pste3g00383 355 Pfam SET domain 126 231 IPR001214 GO:0005515
Pste3g00383 355 FunFam Histone-lysine N-methyltransferase 30 270 - -
Pste3g00383 355 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 292 IPR025787 -
Pste3g00383 355 SMART PostSET_3 238 254 IPR003616 -
Pste3g00383 355 Gene3D SET domain 34 271 IPR046341 -
Pste3g00383 355 CDD SET_ASHR3-like 116 254 - -
Pste3g00383 355 ProSiteProfiles AWS domain profile. 64 113 IPR006560 GO:0005634|GO:0042054
Pste3g00383 355 SMART set_7 115 238 IPR001214 GO:0005515
Pste3g00383 355 ProSiteProfiles Post-SET domain profile. 238 254 IPR003616 -
Pste3g00383 355 SUPERFAMILY SET domain 38 250 IPR046341 -
Pste3g00383 355 ProSiteProfiles SET domain profile. 115 232 IPR001214 GO:0005515
Pste3g00383 355 SMART shorttest3 64 114 IPR006560 GO:0005634|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00383 Pste-Chr3 2047299 2062297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00383 88 253 C2H2 Transcription Factor Family AT2G23740 34.946 1.79e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste3g00383 SET 3.9e-19 No_clan