Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00381 GGCAGAAGTAAAAAAGACAAGAACATGGAAAGTTGAGAAAGTCCATCCATCCTCACTTAAAGATTTAGTGTTTGGAAATTCAACTAAGACCACATGCCTTCTCTTTCTCTTTCTGTCTTCCCAACCTCACTTCAAAACCCTAACTTCACCAATTTCATCCATTTCCGTCTAAATTATGCGATTCCCTTCCCACCAGCTTTTCACCCTCCAATCCTCTGCAAAGCTTTGAGGGATTCCGGCGAGGACATCAAGGCGGTCCTCAAGTCCGACGGCGGCGGAGACGGAGGTGGCGACGGTGGTGGTGGGGGTGGCGGTGGCGGTGACCCGCACTCCGACAAGAAAGAAGGGCCGTTGCCGGAGTGGTTGAATTTCACTTCCGATGACGCCAAAACGGTGCTTGCGGCTCTCGCTATATCGCTTGCGTTTCGTTCTTTTGTGGCGGAGCCGAGGTACATTCCTTCGCTGTCAATGTATCCTACATTTGATGTTGGAGATCGAATTGTTGCTGAGAAGGCTGTCAGGCACTGGAAACATCTGGCTTTAGGGTTTTTTTCTATTTTAGACTCTGTATGCGAGCTGTTGCCAATTGACAGTAGCACTGAACTGGACTTTCTTTCCGTTATGATGCATCTCCATTGTAAAGGTACATCTTCATGTTTTCAGGTTTCGTACTACTTTAGAAAACCATGTGCGAGTGACATAGTGATATTTAAAAGCCCTCCAGTGCTTCAAGAAGTTGGATATAGTGACGATGATGTTTTTATAAAGCGTGTGGTTGCAAAGGAAGGTGATATTGTGGAGGTTCGTAAAGGGCATCTTGTAGTTAATGGGGTTGAGAGGAATGAAGAGTACATCCTTGAACCACCTGCTTATGAGATGAAACCTACTCGAGTGCCAGAAAACTACGTGTTTGTGATGGGAGACAACCGCAATAACAGCTATGATTCTCATGTGTGGGGTCCCCTTCCAGCCAAGAACATCATAGGTAGATCAGTTTTTCGCTATTGGCCACCAAATAGAATTGCTGGCACAGTTTCTAAGGATGGTTGCCCTGTTGAAACCACGCAGCAGAGCACTACTCTTCCATCTTAATGACCACTCCTTTGTATAACATTTTCCATCGTGTTCTTCACATTCCTCATATTCCCTCTTGCAAATGCTCATCGTCCTAAAATCATTTATTAATTTAAGATCACCATTAGCAACACATTCTTATTACCAGACATTTTATTATTGGTTAGAATTTATTTAAAACTATAAAATTATGAGAGACAAAAGATATTTAGTGAAAAGTGAACCTACTTTACTTGAATTTGTATTTTTAAATAAATTCAGTTTATAATATTTTGTTCTTGAA 1357 0.4237 MPSLSLSVFPTSLQNPNFTNFIHFRLNYAIPFPPAFHPPILCKALRDSGEDIKAVLKSDGGGDGGGDGGGGGGGGGDPHSDKKEGPLPEWLNFTSDDAKTVLAALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKAVRHWKHLALGFFSILDSVCELLPIDSSTELDFLSVMMHLHCKGTSSCFQVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEEYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAGTVSKDGCPVETTQQSTTLPS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00381 332 NCBIfam signal peptidase I 99 307 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g00381 332 ProSitePatterns Signal peptidases I signature 3. 272 285 IPR019758 GO:0004252|GO:0016020
Pste3g00381 332 ProSitePatterns Signal peptidases I serine active site. 123 130 IPR019756 GO:0004252|GO:0016020
Pste3g00381 332 FunFam Peptidase/ serine-type peptidase 175 304 - -
Pste3g00381 332 PANTHER SIGNAL PEPTIDASE I 86 311 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g00381 332 CDD S26_SPase_I 117 299 IPR019533 GO:0004252|GO:0006465
Pste3g00381 332 Gene3D Umud Fragment, subunit A 111 317 - -
Pste3g00381 332 Pfam Signal peptidase, peptidase S26 98 305 IPR019533 GO:0004252|GO:0006465
Pste3g00381 332 SUPERFAMILY LexA/Signal peptidase 112 311 IPR036286 -
Pste3g00381 332 PRINTS Bacterial leader peptidase 1 (S26A) family signature 114 130 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g00381 332 PRINTS Bacterial leader peptidase 1 (S26A) family signature 267 286 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g00381 332 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00381 Pste-Chr3 2035256 2038043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00381 190 306 MADS-box Gene Family AT1G29960 30.769 1.18e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00381 3 2035256 2038043 Pste3g00381 3 2035256 2038043 ECH