Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00375 ATGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGACTTGCCCAGAAGAAAAAGGATTTTTTCCCTTTCAATTCATGCGCCAAAGACACCAACTTTGGTGGATACTGGTGGTATAGCAGCGACGAAGACGACGAAACCGACACCCTTTTCTCCTCCAAGAGCCTCTCCTCCGACTCCTCCAGGTCCAGGTCCAGGCGCCGGCGCCGGAAAAATCAACTGTGCTCCGACATGGGTGTTCTGCCGCTTGATGGGAAGGTGAAGGACACGTTCGCCGTGGTGAAGCGCTCCAGCGACCCTTACACTGACTTCAGGACTTCCATGCTTGAAATGATCGTCGAGAAGCAGATTTTTTCGCCCCAGGATTTGGAGAATCTGTTGCAATGTTTTCTGTCGCTCAATTCCTATCATCATCATAATATAATTCTCCAAGTCTTCACCGAGATTTGGGAGGCTCTGTTTTCTGACTGGTTTTGA 492 0.4817 MTKKKKKKKKKKKKKKKRLAQKKKDFFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRSRRRRRKNQLCSDMGVLPLDGKVKDTFAVVKRSSDPYTDFRTSMLEMIVEKQIFSPQDLENLLQCFLSLNSYHHHNIILQVFTEIWEALFSDWF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00375 163 NCBIfam uncharacterized plant-specific domain TIGR01568 96 159 IPR006458 -
Pste3g00375 163 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Pste3g00375 163 Coils Coil 2 25 - -
Pste3g00375 163 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g00375 163 MobiDBLite consensus disorder prediction 50 76 - -
Pste3g00375 163 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 160 IPR038933 GO:0045892
Pste3g00375 163 Pfam Transcriptional repressor, ovate 102 159 IPR006458 -
Pste3g00375 163 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00375 Pste-Chr3 1977753 1978244 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste3g00375 Ovate 5.6e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00375 3 1977753 1978244 Pste3g00375 3 1977753 1978244 ECH