Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00365 GGACCAACAAACTTTAGAAGAAACTGAAGCAGAAGCAGAAGAAGATTATAAAAGAGCGATTCTGGAGTTGAAGTGGTTCGAGTTCGAAGCGATGAGTTCAGGAAGCAATAACAGCGACAAGGAGAAGGAGAAGGAGAAGCAGAGGGTGAGTCGCACGTCGCTGATACTGTGGCACGCGCACCAAAACGACGCCGCGTCGGTGCGGAAGCTCCTCCAGGAGGATCCGTCGCTGGTGAAGGCCAGAGATTACGACAACCGCACGCCGCTCCACGTCGCGTCGCTGCACGGCTGGATCGACGTCGCCGCGTGTTTGATTGAGTTCGGCGCCGATGTCAACGCGCAAGATCGCTGGAGAAACACCCCTCTGGCGGATGCGGAAGGAGCTAAGAAGACGAACGTGATTGAGCTTTTGCAATCGCATGGAGGATTATCTTTTGGCCAAAATGGAAGCCATTTTGATCCAAAGCCTGTTGCGCCGCCGTTGCCTAACAAGTGTGATTGGGAAATTGAGCCTACTGAGCTCGATTTCTCCACTTCGGTTCGAATTGGAAAGGGGTCTTTTGGTGAGATTTTAAGAGCCCTTTGGCGTGGGACACCAGTTGCTGTTAAACGTATTCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACTGACAGGAAACCCCTTATGCTAATTACCGAGTATCTAAAAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCTATAACAGCTATCAACTTTTCCATGGATATTGTCAGAGGAATGGCCTATCTTCACAATGAACCAAACGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTACTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATTACAGTCCAGAGTTCTCATGATGTATACAAGATGACTGGTGAAACTGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACATCGGAGATACGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCACCATTTGCAGATTTTCAACCGCACACCTGTACAGTTAAAGGGGTGGTTAATAATCATTATGCTTCAGTCCTCCTTCACCTTATGTTTAGTACTGTTGCTGCGTGGTTAACGGAGCAGTGTTGGGCTCATGACATGAGTCAGAGACCATCCTTCATAGAGATCCTTAAACGGCTTGAAAAGATCAAGGAGAATTTACCTACTGATCATCACTGGCACCTGTTTGCTTCATAAATGTCTAATAGCATTAATTTGTTCAGAAATTCAGATATGATTTATTTAGCATTACCATCCTCTGCTTTGCTGCCGGAATTATGGATTGGTTGAGCCCAACTGAAAACCTGCAAAGTCTATACTTGTTTTGTACTGTTTGGATTCGAGCAAAAAAGGTGATGTTGATTACCAGCCTTAGGTCCTACGTTTTTATCTCACTAAGGCTTTTACTTCATTCTAGTGAGCATATGCAAGTTGTTGCCTATGTGTAAAGTGTTTCAAGTGTACAAACTATTGAGGAAGTAAGTCACTTCATGCTATCCGTTGTTTCATGCTCCATCTTTCGTTTAAAAAATTAATATCACTTTCTATTCTTGTATTTTGCCTTACCAATTCCTCTGCCATTGATGCTACCAACTTCTTCGGTATTGCACTTCTCATGGGAGTTTCCTTTTGCTGGTTTCACGAAAATTCATGTGAAAAAATTATAGTCTTGATAAATTGTGGACGGTGAACCATCAGGAGCAAATAGTTGCAAGCTGCAAGCTGCAAGCTGCAAGCTTCAATCCCAACTCCAGCCCAAATGCAAAGTGGAAGAGAAAATGACAGATTTTTCTTTTTTAGTGAAGAGAAAATGACAGATGTGCCATGCATTGATACATGAATTTGTATTCACCTTTTTAATTTATTCGTGCAAATTATAGGTCTTGGCCCGC 2061 0.4313 MSSGSNNSDKEKEKEKQRVSRTSLILWHAHQNDAASVRKLLQEDPSLVKARDYDNRTPLHVASLHGWIDVAACLIEFGADVNAQDRWRNTPLADAEGAKKTNVIELLQSHGGLSFGQNGSHFDPKPVAPPLPNKCDWEIEPTELDFSTSVRIGKGSFGEILRALWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLKGGDLHQYLKEKGALSPITAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFADFQPHTCTVKGVVNNHYASVLLHLMFSTVAAWLTEQCWAHDMSQRPSFIEILKRLEKIKENLPTDHHWHLFAS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00365 424 SMART ANK_2a 54 83 IPR002110 GO:0005515
Pste3g00365 424 SMART ANK_2a 87 117 IPR002110 GO:0005515
Pste3g00365 424 MobiDBLite consensus disorder prediction 1 20 - -
Pste3g00365 424 FunFam Integrin-linked protein kinase family 225 422 - -
Pste3g00365 424 Pfam Ankyrin repeats (many copies) 55 92 IPR002110 GO:0005515
Pste3g00365 424 CDD STKc_MAP3K-like 152 406 - -
Pste3g00365 424 ProSitePatterns Protein kinases ATP-binding region signature. 152 173 IPR017441 GO:0005524
Pste3g00365 424 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Pste3g00365 424 SMART serkin_6 146 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00365 424 ProSiteProfiles Ankyrin repeat region circular profile. 54 86 - -
Pste3g00365 424 Gene3D - 2 124 IPR036770 -
Pste3g00365 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pste3g00365 424 Gene3D Phosphorylase Kinase; domain 1 130 224 - -
Pste3g00365 424 FunFam serine/threonine-protein kinase STY46-like 139 225 - -
Pste3g00365 424 Pfam Protein tyrosine and serine/threonine kinase 150 406 IPR001245 GO:0004672|GO:0006468
Pste3g00365 424 ProSiteProfiles Protein kinase domain profile. 146 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00365 424 SUPERFAMILY Ankyrin repeat 25 112 IPR036770 -
Pste3g00365 424 PIRSF ILK 1 424 - -
Pste3g00365 424 SUPERFAMILY Protein kinase-like (PK-like) 138 420 IPR011009 -
Pste3g00365 424 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 78 411 - -
Pste3g00365 424 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00365 Pste-Chr3 1922495 1930275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00365 11 424 MAP Kinase Kinase Kinase AT1G14000 79.469 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pste3g00365 PK_Tyr_Ser-Thr 1e-58 CL0016