Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00360 GAGAACATGGAACCATCAAAGTCTCAGCTTTGAGACACAACACAACACAGTAAACAAAAGCAGTAACCAGAGAAAATGGCTAGTGTTTTTTCAGCATGTTCAGGTTCTGGTCTTCTGTTTCACAGCAAAAAAAGCTTCTACCCTTATGCAGCCAAAGAGGGTCCTCTCCTTCACCTCAAAAGGCCTCTCTCTTCTGCCAACTGTGTAGCTTCTCTGGGGACTGAGATATCAGTGTCTCCAGCAGTTGACACTTTCTGGCAGTGGCTCAAGGAAGAGGGTGTTGTCTCAGGCAAGACCCCAGTGAAGCCTGGTGTGGTGGCAGAAGGGCTAGGATTGGTTGCACTCAGGGACATTTCAAGGAATGAGGTTGTCTTGCAGGTTCCCAAGAGGCTGTGGATCAACCCTGATGCTGTGGCAGCTTCTGAGATTGGGAAAGTGTGCAGTGGATTGAAGCCTTGGTTGGCTGTTGCACTGTTTCTGATAAGAGAGAGGTCAAGGGATGATTCTCTTTGGAAACACTACTTCAACATTCTGCCAAAGGAAACTGACTCTACTATATATTGGTCAGAGGAGGAGCTCTATGAACTACAAGGGACTCAACTTCTGAACACTACAGTGAGTGTGAAAGAGTATGTGAAGAGTGAATTTAGGAGACTGGAAGAAGAAATCATACTCCCAAATAAGAAGCTATTCCCTTCTCCTATTACACTTGATGACTTCTTATGGGCCTTTGGAATTCTAAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTGGTTCCATTAGCTGACTTGATAAACCACAGTGTCAGAGTAACTACAGAAGATCATGCTTATGAAGTTAAAGGAGCAGCAGGCCTTTTCTCCTGGGATTACCTATTTTCCCTAAGGAGCCCCCTTTCTCTCAAGGCTGGGGACCAGGTATATATCCAATATGATTTGAATAAAAGCAATGCCGAGTTGGCTCTGGACTATGGTTTCATTGAACCAAATGCAGATCGGAATGCATATACCTTGACACTGCAGATATCTGAGTCAGACCCCTTTTATGATGACAAACTAGACATTGCTGAGTCCAATGGTTTTGGTGAGATAGCATACTTTGATATCTTCTACAACCGCCCCCTTCCACCAGGGTTGCTTCCATATCTGAGACTAGTAGCTCTAGGGGGCACTGATGCTTTCTTGTTGGAGTCACTGTTTAGAAACTCCATTTGGGGTCATCTTGAAGTGCCTGTGAGCCGTGACAATGAGGAGCTAATATGCAGAGATCAAAAGTTGAAAGAAGCAAAGCTAGATTCAAGGCATGCTATAGCAGTTGGAGTTAGAGAAGGAGAGAAGCAACTCCTACAACAAATTGATGAGATCTTCAAGGAGAAAGAATTGGAATTGGATCAGTTAGAATATTATCAAGAAAGGAGGCTTAAGGACCTTGGACTTTGCGGGGAAAATGGTGATATTCTTGGAGACCTTGGAAAATTCTTCTAGGAAACAGAACCAATTGCACTCATTAAAGAAATCGTGTACATTTCCAAAAGATGAGAAAACATAAACTCTTGGTAAATCACTAAGGAGGCTTCCAAGAGTAATCCATGTCATGCATTCAATTGATCTTTGAAGAGTATCATAATCAAGTTTTTGACTCAACCTTATTTGTTACAACCCATTACTTGATTGTTGTTTGTAAAGAGGAAGATGCAGTGTACTTTAGAATGCTTAATCTAAATTTAAGACAATGACTTGAATTATCATTGTATAATAACTATAGTGTACTCAAATTTGAAAAAATAAATTAATTAATTAAGGGTGAAATTGAA 1826 0.4135 MASVFSACSGSGLLFHSKKSFYPYAAKEGPLLHLKRPLSSANCVASLGTEISVSPAVDTFWQWLKEEGVVSGKTPVKPGVVAEGLGLVALRDISRNEVVLQVPKRLWINPDAVAASEIGKVCSGLKPWLAVALFLIRERSRDDSLWKHYFNILPKETDSTIYWSEEELYELQGTQLLNTTVSVKEYVKSEFRRLEEEIILPNKKLFPSPITLDDFLWAFGILRSRAFSRLRNENLVVVPLADLINHSVRVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFIEPNADRNAYTLTLQISESDPFYDDKLDIAESNGFGEIAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESLFRNSIWGHLEVPVSRDNEELICRDQKLKEAKLDSRHAIAVGVREGEKQLLQQIDEIFKEKELELDQLEYYQERRLKDLGLCGENGDILGDLGKFF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00360 473 Coils Coil 469 473 - -
Pste3g00360 473 CDD SET_RBCMT 68 306 IPR044431 GO:0016279|GO:0018022
Pste3g00360 473 Gene3D set domain protein methyltransferase, domain 1 52 306 - -
Pste3g00360 473 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 53 305 - -
Pste3g00360 473 SMART set_7 72 297 IPR001214 GO:0005515
Pste3g00360 473 SUPERFAMILY SET domain 54 311 IPR046341 -
Pste3g00360 473 ProSiteProfiles SET domain profile. 67 291 IPR001214 GO:0005515
Pste3g00360 473 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 56 421 - -
Pste3g00360 473 Gene3D - 307 401 IPR036464 -
Pste3g00360 473 Gene3D - 402 452 IPR036464 -
Pste3g00360 473 PIRSF RMT_SET 1 472 IPR011192 GO:0009507|GO:0030785
Pste3g00360 473 Pfam Rubisco LSMT substrate-binding 323 401 IPR015353 -
Pste3g00360 473 Pfam SET domain 84 290 IPR001214 GO:0005515
Pste3g00360 473 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 314 466 IPR036464 -
Pste3g00360 473 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 20 471 IPR011192 GO:0009507|GO:0030785
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00360 51 246 NAC Transcription Factor Family AT3G56570 27.670 8.96e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste3g00360 SET 7.7e-09 No_clan